JAL-1503 whats new and release history for 2.8.1 (still not complete)

[jalview.git] / help / helpTOC.xml

diff --git a/help/helpTOC.xml b/help/helpTOC.xml
index 4ff36ba..a65cafe 100755 (executable)
--- a/help/helpTOC.xml
+++ b/help/helpTOC.xml
@@ -21,10 +21,9 @@
 <toc version="1.0">
 <tocitem text="Jalview Documentation" target="home" expand="true" >
  <tocitem text="What's new" target="new" expand="true">
- <tocitem text="Protein Disorder Prediction" target="disorder"/>
-   <tocitem text="Alignment Conservation Analysis" target="aacon"/>
-  <tocitem text="RNAalifold RNA Secondary Structure Prediction" target="rnaalifold"/>
- <tocitem text="Select columns containing sequence features" target="seqfeatures.settings"/>
+    <tocitem text="RNAalifold RNA Secondary Structure Prediction" target="rnaalifold"/>
+    <tocitem text="Select columns containing sequence features" target="seqfeatures.settings.selcols"/>
+    <tocitem text="Support for PAM250 for trees and PCA calculations" target="subtMatrices.pam250"/>
   </tocitem>
   <tocitem text="Editing Alignments" target ="edit"/>  
   <tocitem text="Cursor Mode" target="cursor"/>