JAL-1152 annotation sorting preferences and help documentation

[jalview.git] / help / helpTOC.xml

diff --git a/help/helpTOC.xml b/help/helpTOC.xml
index 48a2b2a..4c09e8f 100755 (executable)
--- a/help/helpTOC.xml
+++ b/help/helpTOC.xml
@@ -116,17 +116,18 @@
        <tocitem text="Window Menus" target="menus" expand="false">
                <tocitem text="Desktop Window" target="desktopMenu"/>
                <tocitem text="Alignment Window" target="alMenu">
-                <tocitem text="File Menu" target="alwFile"/>
-                <tocitem text="Edit Menu" target="alwEdit"/>
-                               <tocitem text="Select Menu" target="alwSelect"/> 
-                <tocitem text="View Menu" target="alwView"/>
-                               <tocitem text="Format Menu" target="alwFormat"/>
-                <tocitem text="Colour Menu" target="alwColour"/>
-                <tocitem text="Calculation Menu" target="alwCalc"/>
-               <tocitem text="Web Service Menu" target="wsMenu"/>
-               <tocitem text="Annotation Menus" target="annotMenus"/>
-               <tocitem text="Popup Menu" target="popMenu"/>
-                </tocitem>
+            <tocitem text="File Menu" target="alwFile"/>
+            <tocitem text="Edit Menu" target="alwEdit"/>
+                       <tocitem text="Select Menu" target="alwSelect"/> 
+            <tocitem text="View Menu" target="alwView"/>
+            <tocitem text="Annotations Menu" target="alwAnnotations"/>
+                       <tocitem text="Format Menu" target="alwFormat"/>
+            <tocitem text="Colour Menu" target="alwColour"/>
+            <tocitem text="Calculation Menu" target="alwCalc"/>
+                       <tocitem text="Web Service Menu" target="wsMenu"/>
+                       <tocitem text="Annotation Panel Menu" target="annotPanelMenu"/>
+                       <tocitem text="Popup Menu" target="popMenu"/>
+        </tocitem>
        </tocitem>
         <tocitem text="Preferences" target="preferences"/>
        <tocitem text="Memory Settings" target="memory" expand="false">