git://source.jalview.org / jalview.git / blobdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
Updated help pages
[jalview.git] / help / html / colourSchemes / pid.html
diff --git a/help/html/colourSchemes/pid.html b/help/html/colourSchemes/pid.html
new file mode 100755 (executable)
index 0000000..7eb3af7
--- /dev/null
+++ b/help/html/colourSchemes/pid.html
@@ -0,0 +1,33 @@
+<html>\r
+<head>\r
+<style type="text/css">\r
+<!--\r
+td {\r
+       text-align: center;\r
+}\r
+-->\r
+</style>\r
+</head>\r
+\r
+<body>\r
+<p><em>PID Colours</em><br>\r
+  <br>\r
+  The PID option colours the residues (boxes and/or text) according to the percentage\r
+  of the residues in each column that agree with the consensus sequence. Only\r
+  the residues that agree with the consensus residue for each column are coloured.</p>\r
+<table width="200" border="1">\r
+  <tr>\r
+    <td bgcolor="#6464FF">&gt; 80 %</td>\r
+  </tr>\r
+  <tr>\r
+    <td bgcolor="#9999FF">&gt; 60 %</td>\r
+  </tr>\r
+  <tr>\r
+    <td bgcolor="#CCCCFF">&gt; 40%</td>\r
+  </tr>\r
+  <tr>\r
+    <td>&lt; 40%</td>\r
+  </tr>\r
+</table>\r
+</body>\r
+</html>\r