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<body>\r
<p><strong>Sequence Features File Format</strong></p>\r
+<p>Note: This format is primarily intended to be used for the applet, which does \r
+ not have an XML parser and where file size must be kept to a minimum to reduce \r
+ download time.</p>\r
<p>(Prior to version 2.08 known as the "Groups file")<br>\r
A precalculated Features file can read onto an alignment from the command line \r
("-features"), by drag and dropping the features file onto an alignment \r
<p>featureType<tab>colour<br>\r
description<tab>sequenceId<tab>sequenceIndex<tab>start<tab>end<tab>featureType</p>\r
<p>eg<br>\r
- <font size="2" face="Courier New, Courier, mono">domain red<br>\r
+ <font size="3" face="Courier New, Courier, mono">domain red<br>\r
metal ion-binding site 00ff00<br>\r
transit peptide 0,105,215<br>\r
chain 225,105,0<br>\r
Your Own description here Q93XJ9_SOLTU -1 49 144 chain</font></p>\r
<p>An additional option in Jalview 2.08 is to group features in the following \r
way: </p>\r
-<p><font size="2" face="Georgia, Times New Roman, Times, serif">STARTGROUP<tab>My feature groupA<br>\r
+<p><font size="3" face="Georgia, Times New Roman, Times, serif">STARTGROUP<tab>My feature groupA<br>\r
....Many Feature descriptions here<br>\r
ENDGROUP<tab>My feature groupA</font><br>\r
</p>\r