+++ /dev/null
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- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
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- * Jalview is free software: you can redistribute it and/or
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-<head>
-<title>Exporting alignments as artwork</title>
-</head>
-<body>
- <p>
- <strong>Exporting alignments as graphics and lineart<a
- name="export"></a></strong>
- </p>
- <p>
- The alignment view can be printed using <strong>File→Print</strong>,
- or exported in a number of ways via the <strong>File→Export</strong>
- menu:
- <ul>
- <li>HTML<br> <em>for viewing in a web browser</em>
- </li>
- <li>PNG - a Portable Networks Graphics image<br> <em>For
- low quality diagrams and powerpoint presentations</em>
- </li>
- <li>EPS - an Encapsulated Postscript Document<br> <em>For
- high quality diagrams and publications.</em>
- <li>SVG - a Scalable Vector Graphics document<br> <em>For
- high quality diagrams in publications and on the web.</em>
- </li>
- <li>BioJS MSA - A JavaScript based multiple sequence alignment
- viewer. <br> <em>For interactive alignment data
- visualisation in a web browser.<br />Get more info about the
- BioJS MSA viewer at <a href="http://msa.biojs.net/">http://msa.biojs.net/</a>
- </em>
- </li>
-
- </ul>
- <a name="htmlexport" />
- <p>
- <strong>Exporting alignments as Web Pages</strong>
- <p>
- In Jalview 2.9, new HTML exporting options were introduced. The
- standard HTML export option displays alignments as SVG documents
- embedded as scrollable panes. Exported pages can optionally also
- include <a href="../features/bioJsonFormat.html">BioJSON</a> data,
- which allows Jalview to extract the original data used to create the
- page. Jalview can also generate HTML pages which embed BioJSON data
- and the BioJS MSA viewer, a pure javascript alignment viewer that
- provides a range of interactive analysis capabilities.
- </p>
- <p>
- <p>
- <strong>Tips for working with EPS Files</strong>
- </p>
- <li>The EPS file generated by Jalview contains vector graphics
- which are directly editable in graphics applications such as Adobe
- Illustrator.</li>
- <li>EPS files can be produced as "Text" or
- "Lineart". Use "Text" if you want the final
- document to be MUCH smaller in diskspace and be able to search, edit
- and select text. Use "Lineart" if you want an exact image
- of the alignment as displayed in Jalview. This is useful if a 3rd
- Party EPS viewer does not have the same Font which the EPS file was
- created with.</li>
- <li>When importing an EPS file into a Microsoft office document,
- a snapshot image of the file will be displayed which often looks
- blurred. Right-click the image and choose "Edit image." to
- convert it to word drawing objects which give a truer WYSIWIG
- representation.</li>
- <li>Mac OSX users will find that eps files are automatically
- converted into PDF files.</li>
- </p>
-</body>
-</html>
git://source.jalview.org / jalview.git / blobdiff