+++ /dev/null
-<html>
-<!--
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- *
- * This file is part of Jalview.
- *
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
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- * The Jalview Authors are detailed in the 'AUTHORS' file.
- -->
-<head>
-<title>Alignment Window Menus</title>
-</head>
-
-<body>
- <p>
- <strong>Alignment Window View Menu</strong>
- </p>
- <ul>
- <li><strong>New View (Control T)</strong><em><br>
- Creates a new view from the current alignment view. </em></li>
- <li><strong>Expand Views (X)</strong><em><br> Display
- each view associated with the alignment in its own alignment
- window, allowing several views to be displayed simultaneously. </em></li>
- <li><strong>Gather Views (G)</strong><em><br> Each
- view associated with the alignment will be displayed within its
- own tab on the current alignment window. </em></li>
- <li><strong>Show→(all Columns / Sequences /
- Sequences and Columns</strong>)</strong><em><br> All hidden Columns /
- Sequences / Sequences and Columns will be revealed. </em></li>
- <li><strong>Hide→(all Columns / Sequences /
- Selected Region / All but Selected Region)</strong><em><br>
- Hides the currently selected Columns / Sequences / Region or
- everything but the selected Region.</em></li>
- <li><strong>Automatic Scrolling<br>
- </strong><em>When selected, the view will automatically scroll to
- display the highlighted sequence position corresponding to the
- position under the mouse pointer in a linked alignment or
- structure view.</em></li>
- <li><strong>Show Sequence Features</strong><br> <em>Show
- or hide sequence features on this alignment.</em></li>
- <li><strong><a href="../features/featuresettings.html">Sequence
- Feature Settings...</a></strong><em><br> Opens the Sequence
- Feature Settings dialog box to control the colour and display of
- sequence features on the alignment.</em></li>
- <li><strong>Sequence ID Tooltip</strong><em> (application
- only) <br>This submenu's options allow the inclusion or
- exclusion of non-positional sequence features or database cross
- references from the tooltip shown when the mouse hovers over the
- sequence ID panel.
- </em></li>
- <li><strong>Alignment Properties...<br>
- </strong><em>Displays some simple statistics computed for the current
- alignment view and any named properties defined on the whole
- alignment.</em></li>
- <li><strong><a href="../features/overview.html">Overview
- Window</a><br> </strong><em>A scaled version of the alignment
- will be displayed in a small window. A red box will indicate the
- currently visible area of the alignment. Move the visible region
- using the mouse. </em></li>
- </ul>
- <p> </p>
-</body>
-</html>