Merge branch 'Jalview-JS/jim/JAL-3253-JAL-3418' into Jalview-JS/JAL-3253-applet

[jalview.git] / help / html / menus / desktopMenu.html

diff --git a/help/html/menus/desktopMenu.html b/help/html/menus/desktopMenu.html
index 0d5b698..d716e33 100755 (executable)
--- a/help/html/menus/desktopMenu.html
+++ b/help/html/menus/desktopMenu.html
@@ -43,13 +43,13 @@
           </ul></li>
         <li><strong>Fetch Sequence<br>
         </strong><em>Shows a dialog window in which you can select known ids
-            from Uniprot, EMBL, EMBLCDS or PDB database using Web
+            from UniProt, EMBL, EMBLCDS or PDB database using Web
             Services provided by the European Bioinformatics Institute.</em></li>
         <li><strong>Save Project</strong><br> <em>Saves
             all currently open alignment windows with their current view
             settings and any associated trees, as a <a
-            href="../features/jalarchive.html"
-          >Jalview Archive</a> (which has a .jar extension).
+            href="../features/jalarchive.html">Jalview
+              Archive</a> (which has a .jar extension).
         </em></li>
         <li><strong>Load Project</strong><br> <em>Loads
             Jalview archives <strong>only</strong>.
@@ -82,11 +82,11 @@
             <a href="../webServices/newsreader.html">Jalview News</a>
             dialog box.
         </em></li>
-        <li><strong>Groovy Console...<em> (only
-              available if groovy is on the classpath)</em><br></strong> <em>Open's
-            the <a href="../groovy.html">Groovy Console</a> for
+        <li><strong>Groovy Console...<br></strong> <em>Opens
+            the <a href="../features/groovy.html">Groovy Console</a> for
             interactive scripting.
         </em><strong><br></strong></li>
+        <!--         <li><strong>Enable Experimental Features</strong> <em>Enable or disable <a href="../whatsNew.html#experimental">features still under development</a> in Jalview's user interface. This setting is remembered in your preferences.</em> -->
 
       </ul></li>
     <li><strong>Vamsas</strong> <em>For more details, read the
@@ -130,9 +130,9 @@
         window to the top of the pile when it is selected.
         <ul>
           <li><strong>Close All</strong><br> Close all
-            alignment and analysis windows.<br>
-          <strong>Note: This will erase all alignments from
-              memory, and cannot be undone!</strong></li>
+            alignment and analysis windows.<br> <strong>Note:
+              This will erase all alignments from memory, and cannot be
+              undone!</strong></li>
           <li><strong>Raise Associated Windows</strong><br>
             Bring all windows associated with the current alignment to
             the top of the pile.</li>