updated helpTOC to include recently added features, updated menus and outdated screen...

[jalview.git] / help / html / menus / popupMenu.html

diff --git a/help/html/menus/popupMenu.html b/help/html/menus/popupMenu.html
index f84922e..9d6a0c6 100755 (executable)
--- a/help/html/menus/popupMenu.html
+++ b/help/html/menus/popupMenu.html
@@ -158,14 +158,13 @@
                                                        based URL links that matched the description line.
                                        </em><strong><br> </strong></li>
                        </ul></li>
-               <li><strong>View Structure</strong> </strong><em>This menu is only
-                               visible if you right-click on a sequence name. If the
-                               sequence has an associated PDB file(s), Jalview will open a 'Structure Chooser' 
-                               dialogue with options to select the structure which will eventually be opened in
+               <li><strong>3D Structure Data...</strong> </strong><em>This menu is 
+                               visible when you right-click on a sequence name. When this option is clicked, Jalview will open a <a href="../features/structurechooser.html">'Structure Chooser' </a>  
+                                dialogue with options to select the structure which will eventually be opened in
                                a 3D interactive view.<br> These entries will only be present if the sequence
-                               has <a href="../features/viewingpdbs.html">associated PDB
-                                       structures</a>.<br /> If the sequence or alignment has RNA structure,
-                               then <strong>2D RNA</strong> entries will also be present enabling
+                               has <a href="../features/viewingpdbs.html">associated PDB structures</a>.
+                               <br /> If the sequence or alignment has RNA structure,
+                               then <strong>VARNA 2D Structure</strong> entries will also be present enabling
                                you to open a linked view of the RNA structure in <a
                                href="../features/varna.html">VARNA</a>.
                </em>