JAL-2418 more release notes
[jalview.git] / help / html / releases.html
index d1a1c59..3482f71 100755 (executable)
@@ -107,17 +107,29 @@ li:before {
               <!--  JAL-384 -->Custom shading schemes created via groovy
               scripts
             </li>
-            <li>
-              <!--  JAL-2491 -->linked scrolling of CDS/Protein views
-              via Overview or sequence motif search operations
-            </li>
-            <li>
-              <!--  JAL-2526 -->Efficiency improvements for interacting
-              with alignment and overview windows
-            </li>
-            <li>
-              <!-- JAL-2388 -->Hidden columns and sequences can be
-              omitted in Overview
+            <li>Improved overview window
+              <ul>
+                <li>
+                  <!--  JAL-2526 -->Efficiency improvements for
+                  interacting with alignment and overview windows
+                </li>
+                <li>
+                  <!--  JAL-2491 -->Linked scrolling of CDS/Protein
+                  views via Overview or sequence motif search operations
+                </li>
+                <li>
+                  <!-- JAL-2514 -->Scrolling of wrapped alignment views
+                  via overview
+                </li>
+                <li>
+                  <!-- JAL-2388 -->Hidden columns and sequences can be
+                  omitted in Overview
+                </li>
+                <li>
+                  <!-- JAL-2611 -->Click-drag in visible area allows
+                  fine adjustment of visible position
+                </li>
+              </ul>
             </li>
             <li>
               <!-- JAL-2535 -->Posterior probability annotation from
@@ -564,9 +576,14 @@ li:before {
               proteins
             </li>
             <li>
-              <!-- JAL-2482 -->SIFTs mappings not created for some
-              structures
+              <!-- JAL-2482, JAL-2487 -->Incorrect PDB-Uniprot mappings
+              created from SIFTs, and spurious 'Couldn't open structure
+              in Chimera' errors raised after April 2017 update (problem
+              due to 'null' string rather than empty string used for
+              residues with no corresponding PDB mapping).
             </li>
+            <li><!-- JAL-2592 -->User defined colourschemes called 'User Defined' don't appear in Colours menu</li>
+            <li>
 
 
           </ul>
@@ -608,6 +625,11 @@ li:before {
               <!-- JAL-2590 -->Cannot load Newick trees from eggnog
               ortholog database
             </li>
+            <li>
+              <!-- JAL-2468 -->Status bar shows 'Marked x columns
+              containing features of type Highlight' when 'B" is pressed
+              to mark columns containing highlighted regions.
+            </li>
           </ul>
           <em>Test Suite</em>
           <ul>