+++ /dev/null
-"run Clazz.startProfiling() first
-
- Total new objects: 3208398
-
-count exec(ms)
--------- -------- ------------------------------
-...2100232 ....-40921 undefined[]
-....504006 .....12402 java.lang.StringBuilder
-....436605 ......3414 java.util.HashMap.Node
-....411205 ......2841 jalview.datamodel.Annotation
-....232907 ......1122 Float
-....215619 ......2440 jalview.datamodel.features.FeatureStore$SearchCriterion$3
-....206107 ......1241 java.awt.Color
-....206007 ......1059 Integer
-....205602 ......3110 jalview.datamodel.ResidueCount
-....205602 ......1697 jalview.datamodel.Profile
-....172921 ......3075 java.util.ArrayList.Itr
-....170314 .....-3144 Object[]
-....139806 .......457 Long
-....138605 ......1033 swingjs.json.JSON.JSONList
-....108563 ......1065 java.util.HashMap
-....108553 .....-2025 java.util.HashMap.Node[]
-....107812 ......9397 jalview.datamodel.SequenceFeature
-.....79143 ......1124 java.util.ArrayList
-.....61212 ......1423 java.util.HashMap.EntryIterator
-.....52231 ......1485 java.util.HashMap.EntrySet
-.....47591 .......876 swingjs.json.JSON.JSONMap
-.....46224 .......266 swingjs.json.JSON.JSONList.ListIterator
-......7084 .......450 jalview.datamodel.features.NCNode
-......3870 ........33 jalview.analysis.AlignmentUtils.DnaVariant
-......3076 ........96 java.awt.Dimension
-......2153 ........43 java.beans.PropertyChangeEvent
-......1561 ........13 jalview.datamodel.SequenceCursor
-......1356 ........18 java.util.LinkedHashMap.Entry
-......1329 .......105 jalview.datamodel.features.NCList
-......1290 .......-22 java.util.ArrayList[]
-.......687 .........9 java.util.Hashtable.Entry
-.......684 ........16 jalview.datamodel.DBRefEntry
-.......526 ........16 javajs.util.Lst
-.......505 ........21 java.util.TreeMap.ValueIterator
-.......479 .........9 javax.swing.event.EventListenerList
-.......449 ........19 java.util.HashSet
-.......449 .........9 java.util.ArrayList$SubList$1
-.......449 .........8 java.util.ArrayList.SubList
-.......440 .........0 jalview.datamodel.HiddenCursorPosition
-.......402 ........-8 java.lang.Class[]
-.......346 .........4 java.awt.geom.AffineTransform
-.......346 .........4 java.awt.BasicStroke
-.......325 ........28 java.awt.EventDispatchThread$1
-.......290 ........-7 java.beans.PropertyChangeListener[]
-.......287 ........11 java.util.Hashtable.Enumerator
-.......280 .........5 java.awt.Rectangle
-.......276 .........7 java.util.TreeMap.EntryIterator
-.......274 ........-7 java.awt.Component[]
-.......261 ........10 java.beans.PropertyChangeSupport
-.......261 .........6 java.beans.PropertyChangeSupport.PropertyChangeListenerMap
-.......226 .........3 java.util.Collections.UnmodifiableSet
-.......219 .........1 com.stevesoft.pat.StrPos
-.......206 .........5 java.awt.AWTEventMulticaster
-.......200 .........5 java.util.HashMap.KeySet
-.......200 .........5 java.util.HashMap.KeyIterator
-.......199 ........35 java.awt.EventDispatchThread
-.......199 ........17 java.awt.EventDispatchThread.HierarchyEventFilter
-.......198 .........2 javax.swing.plaf.ComponentInputMapUIResource
-.......187 .........3 java.util.Arrays.ArrayList
-.......182 ........14 java.awt.event.ContainerEvent
-.......176 ........-7 java.util.Hashtable.Entry[]
-.......173 .........2 javax.swing.ActionMap
-.......173 ........-5 javax.swing.KeyStroke[]
-.......171 .........3 java.awt.Insets
-.......169 .........6 javax.swing.AbstractButton.Handler
-.......169 .........5 javax.swing.JMenuItem.MenuItemFocusListener
-.......169 .........2 swingjs.plaf.ButtonListener
-.......154 .........4 javax.swing.KeyboardManager.ComponentKeyStrokePair
-.......145 ........14 java.awt.event.MouseEvent
-.......138 .........1 jalview.datamodel.PDBEntry
-.......136 .........5 java.util.Vector.Itr
-.......132 .........2 javajs.util.SB
-.......126 .........3 java.awt.EventQueueItem
-.......122 .........6 java.io.ByteArrayInputStream
-.......122 .........6 java.io.BufferedInputStream
-.......116 .........1 javax.swing.DefaultButtonModel
-.......112 .........6 java.lang.StringBuffer
-.......100 .........6 jalview.datamodel.features.FeatureStore$SearchCriterion$2
-........99 .........2 javax.swing.event.ChangeEvent
-........94 .......690 javax.swing.JMenuItem
-........88 .........3 java.util.Hashtable
-........88 .........0 java.util.TreeMap.Entry
-........77 .........1 javax.swing.ArrayTable
-........72 .........8 jalview.datamodel.features.FeatureStore
-........72 .........1 java.util.TreeMap
-........69 ........-1 java.util.concurrent.ConcurrentHashMap.HashEntry[]
-........67 .......176 jalview.datamodel.Sequence
-........67 ........15 jalview.datamodel.features.SequenceFeatures
-........67 .........7 java.net.URL
-........65 .........1 javajs.util.AjaxURLConnection
-........64 .........1 java.util.concurrent.ConcurrentHashMap.Segment
-........63 ........-2 jalview.datamodel.SequenceGroup[]
-........60 .........4 java.util.Collections$UnmodifiableCollection$1
-........60 .........0 javax.swing.SizeRequirements
-........55 .......163 swingjs.json.JSON.JSONReader
-........53 .........5 java.util.ArrayList.ListItr
-........53 .........4 javax.swing.JToggleButton.ToggleButtonModel
-........53 ........-2 swingjs.api.js.DOMNode[]
-........51 ........-2 jalview.datamodel.SequenceI[]
-........44 .........2 jalview.util.LinkedIdentityHashSet.IdentityWrapper
-........39 .........5 jalview.datamodel.HiddenColumnsCursor
-........38 .........1 java.lang.StackTraceElement
-........35 .......169 javax.swing.JCheckBoxMenuItem
-........34 ........11 jalview.util.MapList
-........33 .........5 java.util.StringTokenizer
-........33 .........5 jalview.datamodel.Sequence.DBModList
-........33 .........2 jalview.renderer.ScaleRenderer.ScaleMark
-........33 .........2 jalview.ext.ensembl.EnsemblXref
-........32 .........1 java.util.Collections.SynchronizedRandomAccessList
-........31 .........3 java.awt.event.ComponentEvent
-........31 .........2 com.stevesoft.pat.oneChar
-........31 .........1 java.lang.reflect.Constructor
-........31 .........0 java.awt.Point
-........30 .........0 javax.swing.KeyStroke
-........30 .........0 javax.swing.ComponentInputMap
-........28 .........1 com.stevesoft.pat.patInt
-........27 .........1 java.util.Vector
-........24 .........1 javax.swing.DefaultSingleSelectionModel
-........23 .........5 java.util.SubList$1
-........23 .........3 java.util.AbstractList.ListItr
-........23 .........3 jalview.datamodel.Mapping
-........23 .........2 java.util.TreeMap.EntrySet
-........23 .........1 java.util.TreeMap.Values
-........22 ........21 javax.swing.JPopupMenu
-........22 ........14 javax.swing.JPopupMenu.Separator
-........22 .........2 javax.swing.JMenu.WinListener
-........22 .........2 javax.swing.JMenu.MenuChangeListener
-........22 .........2 java.util.TimSort
-........22 .........1 java.util.RandomAccessSubList
-........22 .........0 swingjs.plaf.JSPopupMenuUI.JSMenuKeyListener
-........21 ........41 javax.swing.JMenu
-........21 .........2 jalview.ext.ensembl.EnsemblProtein
-........21 .........0 jalview.ext.ensembl.EnsemblCdna
-........20 .........0 java.awt.FlowLayout
-........18 .......143 javax.swing.JRadioButtonMenuItem
-........18 .........3 java.util.Formatter.Flags
-........18 .........1 java.awt.event.InvocationEvent
-........18 .........0 java.awt.event.ItemEvent
-........18 .........0 java.awt.BorderLayout
-........16 .........0 jalview.datamodel.features.FeatureAttributes.AttributeData
-........15 ........11 javax.swing.JPanel
-........15 .........1 javax.swing.JComponent$2
-........14 .......406 jalview.datamodel.Alignment
-........14 .........7 jalview.datamodel.HiddenColumns
-........14 .........1 jalview.gui.ColourMenuHelper$3
-........14 .........0 java.util.LinkedList.ListItr
-........14 .........0 jalview.schemes.JalviewColourScheme
-........14 .........0 jalview.datamodel.HiddenSequences
-........13 .........2 jalview.util.ReverseListIterator
-........13 .........1 java.util.LinkedHashMap
-........12 .........1 java.awt.AlphaComposite
-........11 .........0 jalview.jbgui.GAlignFrame$1
-........10 .........0 java.util.BitSet
-........10 .........0 java.awt.geom.Rectangle2D.Float
-........10 .........0 java.awt.Color[]
-.........9 .........1 java.util.LinkedHashMap.LinkedEntrySet
-.........9 .........1 java.util.LinkedHashMap.LinkedEntryIterator
-.........8 .........5 java.util.Formatter.FormatSpecifier
-.........8 .........0 java.util.Formatter.FixedString
-.........8 .........0 java.awt.Font
-.........8 .........0 com.stevesoft.pat.Pthings
-.........7 .........2 com.stevesoft.pat.Bracket
-.........7 .........1 java.util.concurrent.ConcurrentHashMap.HashEntry
-.........7 .........0 javax.swing.text.Segment
-.........6 .........1 java.util.AbstractList.Itr
-.........6 .........1 com.stevesoft.pat.SubMark
-.........6 .........1 com.stevesoft.pat.OrMark
-.........6 .........1 com.stevesoft.pat.FastMulti
-.........6 .........0 swingjs.JSFontMetrics
-.........6 .........0 javax.swing.SizeRequirements[]
-.........6 .........0 javax.swing.DefaultBoundedRangeModel
-.........6 .........0 java.util.Formatter.FormatString[]
-.........6 .........0 jalview.datamodel.Range
-.........6 .........0 com.stevesoft.pat.Range
-.........5 .........1 swingjs.JSGraphics2D
-.........5 .........0 sun.java2d.StateTrackableDelegate
-.........5 .........0 javax.swing.event.InternalFrameEvent
-.........5 .........0 java.awt.RenderingHints
-.........5 .........0 jalview.renderer.ResidueShader
-.........5 .........0 Boolean
-.........4 .........3 javax.swing.JLabel
-.........4 .........3 jalview.analysis.AnnotationSorter
-.........4 .........2 java.util.concurrent.ConcurrentHashMap
-.........4 .........1 jalview.analysis.AnnotationSorter$2
-.........4 .........0 sun.java2d.StateTrackable.State
-.........4 .........0 javax.swing.JScrollBar.ModelListener
-.........4 .........0 java.util.concurrent.ConcurrentHashMap.Segment[]
-.........4 .........0 java.awt.geom.RectIterator
-.........4 .........0 java.awt.event.AdjustmentEvent
-.........4 .........0 jalview.ext.ensembl.EnsemblSeqProxy.EnsemblSeqType
-.........4 .........0 jalview.analysis.AnnotationSorter$3
-.........4 .........0 jalview.analysis.AnnotationSorter$1
-.........4 .........0 com.stevesoft.pat.End
-.........4 ........-1 jalview.datamodel.Annotation[]
-.........3 ........46 java.awt.image.BufferedImage
-.........3 .........4 java.awt.image.DataBufferInt
-.........3 .........3 java.awt.image.DirectColorModel
-.........3 .........1 java.awt.GridLayout
-.........3 .........1 jalview.datamodel.StartRegionIterator
-.........3 .........0 swingjs.JSToolkit$1
-.........3 .........0 sun.font.FontDesignMetrics.KeyReference
-.........3 .........0 sun.font.FontDesignMetrics
-.........3 .........0 javax.swing.ButtonGroup
-.........3 .........0 java.util.regex.Matcher
-.........3 .........0 java.util.Collections.SynchronizedSet
-.........3 .........0 java.awt.image.SinglePixelPackedSampleModel
-.........3 .........0 jalview.schemes.NucleotideColourScheme
-.........3 .........0 jalview.renderer.ScaleRenderer
-.........3 .........0 jalview.gui.AnnotationPanel.DragMode
-.........3 .........0 jalview.datamodel.features.FeatureAttributes.Datatype
-.........3 .........0 jalview.datamodel.VisibleContigsIterator
-.........3 .........0 jalview.analysis.AnnotationSorter.SequenceAnnotationOrder
-.........2 .......190 javax.swing.JScrollBar
-.........2 ........16 javax.swing.JScrollPane.ScrollBar
-.........2 ........13 com.stevesoft.pat.Regex
-.........2 ........10 javax.swing.JProgressBar
-.........2 .........2 java.awt.Container
-.........2 .........1 java.util.Hashtable.KeySet
-.........2 .........1 java.lang.IndexOutOfBoundsException
-.........2 .........1 java.awt.geom.Path2D.Float.CopyIterator
-.........2 .........1 java.awt.geom.Path2D.Float
-.........2 .........0 javax.swing.text.AbstractDocument.DefaultDocumentEvent
-.........2 .........0 javax.swing.event.UndoableEditEvent
-.........2 .........0 javax.swing.border.LineBorder
-.........2 .........0 javax.swing.JProgressBar.ModelListener
-.........2 .........0 java.util.LinkedHashMap.LinkedValues
-.........2 .........0 java.util.LinkedHashMap.LinkedValueIterator
-.........2 .........0 java.util.IdentityHashMap.KeyIterator
-.........2 .........0 java.util.Collections.SynchronizedCollection
-.........2 .........0 java.util.Collections.SingletonList
-.........2 .........0 java.util.Collections$1
-.........2 .........0 java.util.ArrayDeque
-.........2 .........0 java.lang.Thread
-.........2 .........0 java.lang.StackTraceElement[]
-.........2 .........0 java.awt.event.ActionEvent
-.........2 .........0 jalview.util.IntRangeComparator
-.........2 .........0 jalview.io.SequenceAnnotationReport
-.........2 .........0 jalview.gui.AlignmentPanel[]
-.........2 .........0 jalview.ext.ensembl.EnsemblSequenceFetcher.EnsemblFeatureType[]
-.........2 .........0 jalview.ext.ensembl.EnsemblLookup
-.........2 .........0 jalview.datamodel.features.RangeComparator
-.........2 .........0 jalview.datamodel.SearchResults
-.........2 .........0 jalview.datamodel.AlignmentAnnotation[]
-.........2 .........0 jalview.datamodel.AlignmentAnnotation
-.........2 .........0 jalview.controller.AlignViewController
-.........2 .........0 com.stevesoft.pat.patInf
-.........2 .........0 com.stevesoft.pat.Rthings
-.........2 .........0 com.stevesoft.pat.Or
-.........2 .........0 com.stevesoft.pat.NullPattern
-.........1 .....11161 jalview.gui.AlignFrame
-.........1 .......561 jalview.gui.AlignViewport
-.........1 .......441 jalview.gui.AlignmentPanel
-.........1 ........65 jalview.schemes.ColourSchemes
-.........1 ........57 jalview.gui.SeqPanel
-.........1 ........33 jalview.gui.SeqCanvas
-.........1 ........19 javax.swing.JScrollPane
-.........1 ........11 javax.swing.JTabbedPane
-.........1 ........11 jalview.io.FileFormats
-.........1 .........9 jalview.gui.FeatureRenderer
-.........1 .........8 javax.swing.JRootPane
-.........1 .........8 javax.swing.JInternalFrame.JDesktopIcon
-.........1 .........8 jalview.gui.IdPanel
-.........1 .........7 jalview.gui.AnnotationPanel
-.........1 .........6 jalview.datamodel.ColumnSelection.IntList
-.........1 .........6 jalview.datamodel.ColumnSelection
-.........1 .........5 javax.swing.JToolTip
-.........1 .........5 jalview.jbgui.GAlignFrame$79
-.........1 .........4 jalview.io.gff.SequenceOntologyLite
-.........1 .........3 sun.awt.image.SunWritableRaster$1
-.........1 .........3 jalview.jbgui.GAlignFrame$72
-.........1 .........3 jalview.gui.ViewSelectionMenu
-.........1 .........2 javax.swing.text.GapContent.RemoveUndo
-.........1 .........2 javax.swing.JLayeredPane
-.........1 .........2 jalview.util.LinkedIdentityHashSet$1
-.........1 .........2 jalview.jbgui.GAlignFrame$83
-.........1 .........2 jalview.gui.SequenceRenderer
-.........1 .........2 jalview.gui.IdCanvas
-.........1 .........2 jalview.ext.ensembl.EnsemblLookup$1
-.........1 .........1 swingjs.JSKeyEvent
-.........1 .........1 javax.swing.JViewport
-.........1 .........1 javax.swing.JMenuBar
-.........1 .........1 java.util.concurrent.locks.ReentrantReadWriteLock.ReadLock
-.........1 .........1 java.util.concurrent.locks.ReentrantReadWriteLock
-.........1 .........1 jalview.viewmodel.seqfeatures.FeaturesDisplayed
-.........1 .........1 jalview.jbgui.GAlignFrame$99
-.........1 .........1 jalview.jbgui.GAlignFrame$8
-.........1 .........1 jalview.jbgui.GAlignFrame$59
-.........1 .........1 jalview.jbgui.GAlignFrame$57
-.........1 .........1 jalview.jbgui.GAlignFrame$54
-.........1 .........1 jalview.jbgui.GAlignFrame$50
-.........1 .........1 jalview.jbgui.GAlignFrame$49
-.........1 .........1 jalview.jbgui.GAlignFrame$46
-.........1 .........1 jalview.jbgui.GAlignFrame$41
-.........1 .........1 jalview.jbgui.GAlignFrame$40
-.........1 .........1 jalview.jbgui.GAlignFrame$29
-.........1 .........1 jalview.jbgui.GAlignFrame$23
-.........1 .........1 jalview.jbgui.GAlignFrame$21
-.........1 .........1 jalview.jbgui.GAlignFrame$14
-.........1 .........1 jalview.jbgui.GAlignFrame$13
-.........1 .........1 jalview.jbgui.GAlignFrame$116
-.........1 .........1 jalview.jbgui.GAlignFrame$102
-.........1 .........1 jalview.io.SequenceAnnotationReport$1
-.........1 .........1 jalview.io.FileFormat$3
-.........1 .........1 jalview.io.FileFormat$13
-.........1 .........1 jalview.gui.ScalePanel
-.........1 .........1 jalview.gui.ProgressBar
-.........1 .........1 jalview.gui.IdwidthAdjuster
-.........1 .........1 jalview.gui.ColourMenuHelper$1
-.........1 .........1 jalview.gui.AnnotationLabels
-.........1 .........1 jalview.gui.AlignFrame$3
-.........1 .........1 jalview.datamodel.features.FeatureAttributes$1
-.........1 .........1 jalview.datamodel.features.FeatureAttributes
-.........1 .........0 swingjs.plaf.Resizer
-.........1 .........0 swingjs.plaf.LazyActionMap
-.........1 .........0 swingjs.plaf.JSTabbedPaneUI.TabbedPaneLayout
-.........1 .........0 swingjs.plaf.JSTabbedPaneUI.Handler
-.........1 .........0 swingjs.plaf.JSScrollPaneUI.Handler
-.........1 .........0 swingjs.plaf.JSMenuBarUI.Handler
-.........1 .........0 swingjs.plaf.JSInternalFrameUI.Handler
-.........1 .........0 swingjs.plaf.DefaultMenuLayout
-.........1 .........0 swingjs.JSMouse
-.........1 .........0 swingjs.JSFrameViewer
-.........1 .........0 sun.java2d.StateTrackable.State[]
-.........1 .........0 javax.swing.text.GapContent.UndoPosRef
-.........1 .........0 javax.swing.text.GapContent.InsertUndo
-.........1 .........0 javax.swing.plaf.basic.BasicBorders.MarginBorder
-.........1 .........0 javax.swing.ScrollPaneLayout.UIResource
-.........1 .........0 javax.swing.JViewport.ViewListener
-.........1 .........0 javax.swing.JTabbedPane.ModelListener
-.........1 .........0 javax.swing.JRootPane.RootLayout
-.........1 .........0 javax.swing.JRootPane$1
-.........1 .........0 javax.swing.JComponent.IntVector
-.........1 .........0 javajs.util.AjaxURLStreamHandler
-.........1 .........0 javajs.api.JSFunction[]
-.........1 .........0 java.util.concurrent.locks.ReentrantReadWriteLock.WriteLock
-.........1 .........0 java.util.concurrent.ConcurrentHashMap.KeySet
-.........1 .........0 java.util.concurrent.ConcurrentHashMap.KeyIterator
-.........1 .........0 java.util.LinkedHashMap.LinkedKeySet
-.........1 .........0 java.util.LinkedHashMap.LinkedKeyIterator
-.........1 .........0 java.util.Hashtable.ValueCollection
-.........1 .........0 java.util.Hashtable.EntrySet
-.........1 .........0 java.util.Collections.UnmodifiableRandomAccessList
-.........1 .........0 java.util.Collections.SynchronizedMap
-.........1 .........0 java.util.Collections.EmptyIterator
-.........1 .........0 java.util.Collections.EmptyEnumeration
-.........1 .........0 java.lang.Thread[]
-.........1 .........0 java.awt.event.WindowEvent
-.........1 .........0 java.awt.event.FocusEvent
-.........1 .........0 java.awt.dnd.DropTargetContext
-.........1 .........0 java.awt.dnd.DropTarget
-.........1 .........0 java.awt.color.ColorSpace
-.........1 .........0 java.awt.Rectangle[]
-.........1 .........0 java.awt.LightweightDispatcher
-.........1 .........0 java.awt.EventQueueItem[]
-.........1 .........0 jalview.workers.ConsensusThread
-.........1 .........0 jalview.workers.AlignCalcManager
-.........1 .........0 jalview.viewmodel.styles.ViewStyle
-.........1 .........0 jalview.viewmodel.ViewportRanges
-.........1 .........0 jalview.util.LinkedIdentityHashSet
-.........1 .........0 jalview.schemes.JalviewColourScheme[]
-.........1 .........0 jalview.renderer.ResidueColourFinder
-.........1 .........0 jalview.renderer.AnnotationRenderer
-.........1 .........0 jalview.jbgui.GAlignFrame$98
-.........1 .........0 jalview.jbgui.GAlignFrame$97
-.........1 .........0 jalview.jbgui.GAlignFrame$96
-.........1 .........0 jalview.jbgui.GAlignFrame$95
-.........1 .........0 jalview.jbgui.GAlignFrame$94
-.........1 .........0 jalview.jbgui.GAlignFrame$93
-.........1 .........0 jalview.jbgui.GAlignFrame$92
-.........1 .........0 jalview.jbgui.GAlignFrame$91
-.........1 .........0 jalview.jbgui.GAlignFrame$90
-.........1 .........0 jalview.jbgui.GAlignFrame$9
-.........1 .........0 jalview.jbgui.GAlignFrame$89
-.........1 .........0 jalview.jbgui.GAlignFrame$88
-.........1 .........0 jalview.jbgui.GAlignFrame$87
-.........1 .........0 jalview.jbgui.GAlignFrame$86
-.........1 .........0 jalview.jbgui.GAlignFrame$85
-.........1 .........0 jalview.jbgui.GAlignFrame$84
-.........1 .........0 jalview.jbgui.GAlignFrame$82
-.........1 .........0 jalview.jbgui.GAlignFrame$81
-.........1 .........0 jalview.jbgui.GAlignFrame$80
-.........1 .........0 jalview.jbgui.GAlignFrame$78
-.........1 .........0 jalview.jbgui.GAlignFrame$77
-.........1 .........0 jalview.jbgui.GAlignFrame$76
-.........1 .........0 jalview.jbgui.GAlignFrame$75
-.........1 .........0 jalview.jbgui.GAlignFrame$74
-.........1 .........0 jalview.jbgui.GAlignFrame$73
-.........1 .........0 jalview.jbgui.GAlignFrame$71
-.........1 .........0 jalview.jbgui.GAlignFrame$70
-.........1 .........0 jalview.jbgui.GAlignFrame$7
-.........1 .........0 jalview.jbgui.GAlignFrame$69
-.........1 .........0 jalview.jbgui.GAlignFrame$68
-.........1 .........0 jalview.jbgui.GAlignFrame$67
-.........1 .........0 jalview.jbgui.GAlignFrame$66
-.........1 .........0 jalview.jbgui.GAlignFrame$65
-.........1 .........0 jalview.jbgui.GAlignFrame$64
-.........1 .........0 jalview.jbgui.GAlignFrame$63
-.........1 .........0 jalview.jbgui.GAlignFrame$62
-.........1 .........0 jalview.jbgui.GAlignFrame$61
-.........1 .........0 jalview.jbgui.GAlignFrame$60
-.........1 .........0 jalview.jbgui.GAlignFrame$6
-.........1 .........0 jalview.jbgui.GAlignFrame$58
-.........1 .........0 jalview.jbgui.GAlignFrame$56
-.........1 .........0 jalview.jbgui.GAlignFrame$55
-.........1 .........0 jalview.jbgui.GAlignFrame$53
-.........1 .........0 jalview.jbgui.GAlignFrame$52
-.........1 .........0 jalview.jbgui.GAlignFrame$51
-.........1 .........0 jalview.jbgui.GAlignFrame$5
-.........1 .........0 jalview.jbgui.GAlignFrame$48
-.........1 .........0 jalview.jbgui.GAlignFrame$47
-.........1 .........0 jalview.jbgui.GAlignFrame$45
-.........1 .........0 jalview.jbgui.GAlignFrame$44
-.........1 .........0 jalview.jbgui.GAlignFrame$43
-.........1 .........0 jalview.jbgui.GAlignFrame$42
-.........1 .........0 jalview.jbgui.GAlignFrame$4
-.........1 .........0 jalview.jbgui.GAlignFrame$39
-.........1 .........0 jalview.jbgui.GAlignFrame$38
-.........1 .........0 jalview.jbgui.GAlignFrame$37
-.........1 .........0 jalview.jbgui.GAlignFrame$36
-.........1 .........0 jalview.jbgui.GAlignFrame$35
-.........1 .........0 jalview.jbgui.GAlignFrame$34
-.........1 .........0 jalview.jbgui.GAlignFrame$33
-.........1 .........0 jalview.jbgui.GAlignFrame$32
-.........1 .........0 jalview.jbgui.GAlignFrame$31
-.........1 .........0 jalview.jbgui.GAlignFrame$30
-.........1 .........0 jalview.jbgui.GAlignFrame$3
-.........1 .........0 jalview.jbgui.GAlignFrame$28
-.........1 .........0 jalview.jbgui.GAlignFrame$27
-.........1 .........0 jalview.jbgui.GAlignFrame$26
-.........1 .........0 jalview.jbgui.GAlignFrame$25
-.........1 .........0 jalview.jbgui.GAlignFrame$24
-.........1 .........0 jalview.jbgui.GAlignFrame$22
-.........1 .........0 jalview.jbgui.GAlignFrame$20
-.........1 .........0 jalview.jbgui.GAlignFrame$2
-.........1 .........0 jalview.jbgui.GAlignFrame$19
-.........1 .........0 jalview.jbgui.GAlignFrame$18
-.........1 .........0 jalview.jbgui.GAlignFrame$17
-.........1 .........0 jalview.jbgui.GAlignFrame$16
-.........1 .........0 jalview.jbgui.GAlignFrame$15
-.........1 .........0 jalview.jbgui.GAlignFrame$121
-.........1 .........0 jalview.jbgui.GAlignFrame$120
-.........1 .........0 jalview.jbgui.GAlignFrame$12
-.........1 .........0 jalview.jbgui.GAlignFrame$119
-.........1 .........0 jalview.jbgui.GAlignFrame$118
-.........1 .........0 jalview.jbgui.GAlignFrame$117
-.........1 .........0 jalview.jbgui.GAlignFrame$115
-.........1 .........0 jalview.jbgui.GAlignFrame$114
-.........1 .........0 jalview.jbgui.GAlignFrame$113
-.........1 .........0 jalview.jbgui.GAlignFrame$112
-.........1 .........0 jalview.jbgui.GAlignFrame$111
-.........1 .........0 jalview.jbgui.GAlignFrame$110
-.........1 .........0 jalview.jbgui.GAlignFrame$11
-.........1 .........0 jalview.jbgui.GAlignFrame$109
-.........1 .........0 jalview.jbgui.GAlignFrame$108
-.........1 .........0 jalview.jbgui.GAlignFrame$107
-.........1 .........0 jalview.jbgui.GAlignFrame$106
-.........1 .........0 jalview.jbgui.GAlignFrame$105
-.........1 .........0 jalview.jbgui.GAlignFrame$104
-.........1 .........0 jalview.jbgui.GAlignFrame$103
-.........1 .........0 jalview.jbgui.GAlignFrame$101
-.........1 .........0 jalview.jbgui.GAlignFrame$100
-.........1 .........0 jalview.jbgui.GAlignFrame$10
-.........1 .........0 jalview.io.FileFormat[]
-.........1 .........0 jalview.io.FileFormat$9
-.........1 .........0 jalview.io.FileFormat$8
-.........1 .........0 jalview.io.FileFormat$7
-.........1 .........0 jalview.io.FileFormat$6
-.........1 .........0 jalview.io.FileFormat$5
-.........1 .........0 jalview.io.FileFormat$4
-.........1 .........0 jalview.io.FileFormat$2
-.........1 .........0 jalview.io.FileFormat$19
-.........1 .........0 jalview.io.FileFormat$18
-.........1 .........0 jalview.io.FileFormat$17
-.........1 .........0 jalview.io.FileFormat$16
-.........1 .........0 jalview.io.FileFormat$15
-.........1 .........0 jalview.io.FileFormat$14
-.........1 .........0 jalview.io.FileFormat$12
-.........1 .........0 jalview.io.FileFormat$11
-.........1 .........0 jalview.io.FileFormat$10
-.........1 .........0 jalview.io.FileFormat$1
-.........1 .........0 jalview.gui.ViewSelectionMenu$1
-.........1 .........0 jalview.gui.Desktop$13
-.........1 .........0 jalview.gui.Desktop$12
-.........1 .........0 jalview.gui.Desktop$11
-.........1 .........0 jalview.gui.ColourMenuHelper$4
-.........1 .........0 jalview.gui.AnnotationPanel.DragMode[]
-.........1 .........0 jalview.gui.AlignmentPanel$2
-.........1 .........0 jalview.gui.AlignmentPanel$1
-.........1 .........0 jalview.gui.AlignFrame$5
-.........1 .........0 jalview.gui.AlignFrame$4
-.........1 .........0 jalview.gui.AlignFrame$20
-.........1 .........0 jalview.gui.AlignFrame$2
-.........1 .........0 jalview.gui.AlignFrame$1
-.........1 .........0 jalview.ext.ensembl.EnsemblSeqProxy.EnsemblSeqType[]
-.........1 .........0 jalview.ext.ensembl.EnsemblGene$1$2
-.........1 .........0 jalview.ext.ensembl.EnsemblGene$1$1
-.........1 .........0 jalview.ext.ensembl.EnsemblGene$1
-.........1 .........0 jalview.ext.ensembl.EnsemblFeatures
-.........1 .........0 jalview.datamodel.features.SequenceFeatures$2
-.........1 .........0 jalview.datamodel.features.SequenceFeatures$1
-.........1 .........0 jalview.datamodel.features.FeatureAttributes.Datatype[]
-.........1 .........0 jalview.datamodel.Profiles
-.........1 .........0 jalview.datamodel.ProfileI[]
-.........1 .........0 jalview.analysis.CrossRef
-.........1 .........0 jalview.analysis.CodonComparator
-.........1 .........0 jalview.analysis.AnnotationSorter.SequenceAnnotationOrder[]
-.........1 ........-1 jalview.schemes.Consensus[]
-...5994529 ....111547
\ No newline at end of file
git://source.jalview.org / jalview.git / blobdiff