Merge branch 'features/JAL-1541_BioJsMSAViewer-export-option' of https://source.jalvi...

[jalview.git] / resources / lang / Messages.properties

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index f23275a..a2db06d 100644 (file)
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -21,7 +21,7 @@ action.edit = Edit
 action.new = New
 action.open_file = Open file
 action.show_unconserved = Show Unconserved
-action.open_new_aligmnent = Open new alignment
+action.open_new_alignment = Open new alignment
 action.raise_associated_windows = Raise Associated Windows
 action.minimize_associated_windows = Minimize Associated Windows
 action.close_all = Close all
@@ -102,6 +102,7 @@ action.find_all = Find all
 action.find_next = Find next
 action.file = File
 action.view = View
+action.annotations = Annotations
 action.change_params = Change Parameters
 action.apply = Apply
 action.apply_threshold_all_groups = Apply threshold to all groups
@@ -199,8 +200,10 @@ label.average_distance_bloslum62 = Average Distance Using BLOSUM62
 label.neighbour_blosum62 = Neighbour Joining Using BLOSUM62
 label.show_annotations = Show annotations
 label.hide_annotations = Hide annotations
-label.show_all_annotations = Show all annotations
-label.hide_all_annotations = Hide all annotations
+label.show_all_seq_annotations = Show sequence related
+label.hide_all_seq_annotations = Hide sequence related
+label.show_all_al_annotations = Show alignment related
+label.hide_all_al_annotations = Hide alignment related
 label.hide_all = Hide all
 label.add_reference_annotations = Add reference annotations
 label.find_tip = Search alignment, selection or sequence ids for a subsequence (ignoring gaps).<br>Accepts regular expressions - search Help for 'regex' for details.
@@ -238,6 +241,13 @@ label.show_consensus_logo = Show Consensus Logo
 label.norm_consensus_logo = Normalise Consensus Logo
 label.apply_all_groups = Apply to all groups
 label.autocalculated_annotation = Autocalculated Annotation
+label.show_first = Show first
+label.show_last = Show last
+label.struct_from_pdb = Process secondary structure from PDB
+label.use_rnaview = Use RNAView for secondary structure
+label.autoadd_secstr = Add secondary structure annotation to alignment
+label.autoadd_temp = Add Temperature Factor annotation to alignment
+label.structure_viewer = Default structure viewer
 label.min_colour = Minimum Colour
 label.max_colour = Maximum Colour
 label.use_original_colours = Use Original Colours
@@ -411,6 +421,7 @@ label.input_cut_paste = Cut & Paste Input
 label.input_cut_paste_params = Cut & Paste Input - {0}
 label.alignment_output_command = Alignment output - {0}
 label.annotations = Annotations
+label.structure_options = Structure Options
 label.features = Features
 label.overview_params = Overview {0}
 label.paste_newick_file = Paste Newick file
@@ -475,10 +486,13 @@ label.edit_sequences = Edit Sequences
 label.sequence_details = Sequence Details
 label.jmol_help = Jmol Help
 label.all = All
-label.sort_by = Sort by
+label.sort_by = Sort alignment by
 label.sort_by_score = Sort by Score
 label.sort_by_density = Sort by Density
 label.sequence_sort_by_density = Sequence sort by Density
+label.sort_ann_by = Sort annotations by
+label.sort_annotations_by_sequence = Sort by sequence
+label.sort_annotations_by_label = Sort by label
 label.reveal = Reveal
 label.hide_columns = Hide Columns
 label.load_jalview_annotations = Load Jalview Annotations or Features File
@@ -573,7 +587,7 @@ label.figure_id_column_width = Figure ID column width
 label.use_modeller_output = Use Modeller Output
 label.wrap_alignment = Wrap Alignment
 label.right_align_ids = Right Align Ids
-label.sequence_name_italics = Sequence Name Italics
+label.sequence_name_italics = Seq Name Italics
 label.open_overview = Open Overview
 label.default_colour_scheme_for_alignment = Default Colour Scheme for alignment
 label.annotation_shading_default = Annotation Shading Default