JAL-1477 documentation and tooltips

[jalview.git] / resources / lang / Messages.properties

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index 5ae545f..6736791 100644 (file)
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -132,6 +132,9 @@ action.group_link = Group Links
 action.show_chain = Show Chain\r
 action.show_group = Show Group\r
 action.fetch_db_references = Fetch DB References\r
+action.edit = Edit\r
+action.view_flanking_regions = Show flanking regions\r
+label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment\r
 label.str = Str:\r
 label.seq = Seq:\r
 label.structures_manager = Structures Manager\r
@@ -162,6 +165,15 @@ label.redo_command = Redo {0}
 label.principal_component_analysis = Principal Component Analysis\r
 label.average_distance_identity = Average Distance Using % Identity\r
 label.neighbour_joining_identity = Neighbour Joining Using % Identity\r
+label.treecalc_title = {0} Using {1}\r
+label.tree_calc_av = Average Distance\r
+label.tree_calc_nj = Neighbour Joining\r
+label.select_score_model = Select score model\r
+label.score_model_pid = % Identity\r
+label.score_model_blosum62 = BLOSUM62\r
+label.score_model_pam250 = PAM 250\r
+label.score_model_conservation = Physicochemical property conservation\r
+label.score_model_enhconservation = Physicochemical property conservation\r
 label.status_bar = Status bar\r
 label.out_to_textbox = Output to Textbox\r
 label.clustalx = Clustalx\r
@@ -291,7 +303,7 @@ label.successfully_saved_to_file_in_format = Successfully saved to file: {0} in
 label.copied_sequences_to_clipboard = Copied {0} sequences to clipboard.\r
 label.check_file_matches_sequence_ids_alignment = Check that the file matches sequence IDs in the alignment.\r
 label.problem_reading_tcoffee_score_file = Problem reading T-COFFEE score file\r
-label.source_to_target = {0} to '{1}'\r
+label.source_to_target = {0} ... {1}\r
 label.per_sequence_only= Per-sequence only\r
 label.to_file = to File\r
 label.to_textbox = to Textbox\r
@@ -433,6 +445,7 @@ label.calculating_tree = Calculating tree
 label.state_queueing = queuing\r
 label.state_running = running\r
 label.state_complete = complete\r
+label.state_completed = finished\r
 label.state_job_cancelled = job cancelled!!\r
 label.state_job_error = job error!\r
 label.server_error_try_later = Server Error! (try later)\r
@@ -450,8 +463,8 @@ label.jalview_cut = Cut (Jalview Only)
 label.to_upper_case = To Upper Case\r
 label.to_lower_case = To Lower Case\r
 label.toggle_case = Toggle Case\r
-label.edit_name_description = Edit Name/Description\r
-label.create_sequence_feature = Create Sequence Feature\r
+label.edit_name_description = Edit Name/Description ...\r
+label.create_sequence_feature = Create Sequence Feature ...\r
 label.edit_sequence = Edit Sequence\r
 label.edit_sequences = Edit Sequences\r
 label.sequence_details = Sequence Details\r
@@ -615,6 +628,8 @@ label.2d_rna_sequence_name = 2D RNA - {0}
 label.edit_name_and_description_current_group = Edit name and description of current group.\r
 label.view_structure_for = View structure for {0}\r
 label.view_all_structures = View all {0} structures.\r
+label.view_all_representative_structures = View all {0} representative structures.\r
+label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new Jmol view with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment.\r
 label.associate_structure_with_sequence = Associate Structure with Sequence\r
 label.from_file = from file\r
 label.enter_pdb_id = Enter PDB Id\r
@@ -670,7 +685,6 @@ label.case_sensitive = Case Sensitive
 label.lower_case_colour = Lower Case Colour\r
 label.index_by_host = Index by host\r
 label.index_by_type = Index by type\r
-label.enable_enfin_services = Enable Enfin Services\r
 label.enable_jabaws_services = Enable JABAWS Services\r
 label.display_warnings = Display warnings\r
 label.move_url_up = Move URL up\r
@@ -682,7 +696,7 @@ label.your_sequences_have_been_verified = Your sequences have been verified agai
 label.sequence_names_updated = Sequence names updated\r
 label.dbref_search_completed = DBRef search completed\r
 label.show_all_chains = Show all chains\r
-label.fetch_all_param = Fetch all '{0}'\r
+label.fetch_all_param = Fetch all {0}\r
 label.paste_new_window = Paste To New Window\r
 label.settings_for_param = Settings for {0}\r
 label.view_params = View {0}\r
@@ -720,3 +734,7 @@ label.enter_value_increase_conservation_visibility = Enter value to increase con
 label.enter_percentage_identity_above_which_colour_residues = Enter % identity above which to colour residues\r
 label.wswublast_client_credits = To display sequence features an exact Uniprot id with 100% sequence identity match must be entered.\nIn order to display these features, try changing the names of your sequences to the ids suggested below.\n\nRunning WSWUBlast at EBI.\nPlease quote Pillai S., Silventoinen V., Kallio K., Senger M., Sobhany S., Tate J., Velankar S., Golovin A., Henrick K., Rice P., Stoehr P., Lopez R.\nSOAP-based services provided by the European Bioinformatics Institute.\nNucleic Acids Res. 33(1):W25-W28 (2005));\r
 label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences
+label.select_columns_containing = Select columns containing\r
+label.select_columns_not_containing = Select columns that do not contain\r
+option.trim_retrieved_seqs = Trim retrieved sequences\r
+label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.\r