<xs:element name="JSeq" maxOccurs="unbounded" minOccurs="0">
<xs:complexType>
<xs:sequence>
- <xs:element name="features" type="jv:feature"
- minOccurs="0" maxOccurs="unbounded" />
- <xs:element name="pdbids" minOccurs="0" maxOccurs="unbounded">
+ <xs:element name="features"
+ type="jv:feature" minOccurs="0" maxOccurs="unbounded" />
+ <xs:element name="pdbids" minOccurs="0"
+ maxOccurs="unbounded">
<xs:complexType>
<xs:complexContent>
- <xs:extension base="jv:pdbentry">
+ <xs:extension
+ base="jv:pdbentry">
<xs:sequence>
- <xs:element name="structureState" minOccurs="0"
+ <xs:element
+ name="structureState" minOccurs="0"
maxOccurs="unbounded">
<xs:complexType>
<xs:simpleContent>
- <xs:extension base="xs:string">
- <xs:attributeGroup ref="jv:swingwindow" />
- <xs:attribute name="visible" type="xs:boolean" />
- <xs:attribute name="viewId" type="xs:string"
- use="optional">
+ <xs:extension
+ base="xs:string">
+ <xs:attributeGroup
+ ref="jv:swingwindow" />
+ <xs:attribute
+ name="visible" type="xs:boolean" />
+ <xs:attribute
+ name="viewId" type="xs:string" use="optional">
<xs:annotation>
<xs:documentation>
additional
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="alignwithAlignPanel"
- type="xs:boolean" use="optional" default="true">
+ <xs:attribute
+ name="alignwithAlignPanel" type="xs:boolean"
+ use="optional" default="true">
<xs:annotation>
<xs:documentation>
Flag
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="colourwithAlignPanel"
- type="xs:boolean" use="optional" default="false">
+ <xs:attribute
+ name="colourwithAlignPanel" type="xs:boolean"
+ use="optional" default="false">
<xs:annotation>
<xs:documentation>
Flag
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="colourByJmol" type="xs:boolean"
- use="optional" default="true">
+ <xs:attribute
+ name="colourByJmol" type="xs:boolean" use="optional"
+ default="true">
<xs:annotation>
<xs:documentation>
Flag
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="type" type="xs:string"
- use="optional">
+ <xs:attribute
+ name="type" type="xs:string" use="optional">
<xs:annotation>
<xs:documentation>
An
</xs:complexContent>
</xs:complexType>
</xs:element>
- <xs:element name="hiddenSequences" type="xs:int"
- minOccurs="0" maxOccurs="unbounded" />
- <xs:element name="rnaViewer" minOccurs="0" maxOccurs="unbounded">
+ <xs:element name="hiddenSequences"
+ type="xs:int" minOccurs="0" maxOccurs="unbounded" />
+ <xs:element name="rnaViewer" minOccurs="0"
+ maxOccurs="unbounded">
<xs:annotation>
- <xs:documentation>Reference to a viewer showing RNA structure
- for this sequence. Schema supports one viewer showing multiple
- annotations for multiple sequences, though currently only one
- annotation for one sequence (gapped or trimmed) is used
+ <xs:documentation>
+ Reference to a viewer showing
+ RNA structure for this sequence.
+ Schema supports one viewer
+ showing multiple annotations for
+ multiple sequences, though
+ currently only one annotation
+ for one sequence (gapped or
+ trimmed) is used
</xs:documentation>
</xs:annotation>
<xs:complexType>
<xs:sequence>
- <xs:element name="secondaryStructure" minOccurs="1"
+ <xs:element
+ name="secondaryStructure" minOccurs="1"
maxOccurs="unbounded">
<xs:complexType>
- <xs:attribute name="title" type="xs:string" />
- <xs:attribute name="annotationId" type="xs:string"
- use="required">
+ <xs:attribute
+ name="title" type="xs:string" />
+ <xs:attribute
+ name="annotationId" type="xs:string" use="required">
<xs:annotation>
- <xs:documentation>id attribute of Annotation in
- vamsasModel for
- the secondary structure annotation shown
- in the viewer
+ <xs:documentation>
+ id attribute
+ of
+ Annotation
+ in
+ vamsasModel
+ for the
+ secondary
+ structure
+ annotation
+ shown in the
+ viewer
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="gapped" type="xs:boolean">
+ <xs:attribute
+ name="gapped" type="xs:boolean">
<xs:annotation>
- <xs:documentation>if true the RNA structure is shown with gaps, if false without
+ <xs:documentation>
+ if true the
+ RNA
+ structure is
+ shown with
+ gaps, if
+ false
+ without
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="viewerState" type="xs:string">
+ <xs:attribute
+ name="viewerState" type="xs:string">
<xs:annotation>
- <xs:documentation>name of the project jar entry that holds
- the VARNA viewer state for the structure
+ <xs:documentation>
+ name of the
+ project jar
+ entry that
+ holds the
+ VARNA viewer
+ state for
+ the
+ structure
</xs:documentation>
</xs:annotation>
</xs:attribute>
</xs:complexType>
</xs:element>
</xs:sequence>
- <xs:attributeGroup ref="jv:swingwindow" />
- <xs:attribute name="title" type="xs:string" />
- <xs:attribute name="viewId" type="xs:string">
+ <xs:attributeGroup
+ ref="jv:swingwindow" />
+ <xs:attribute name="title"
+ type="xs:string" />
+ <xs:attribute name="viewId"
+ type="xs:string">
<xs:annotation>
- <xs:documentation>An id unique to the RNA viewer panel
+ <xs:documentation>
+ An id unique to the RNA
+ viewer panel
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="dividerLocation" type="xs:int">
+ <xs:attribute name="dividerLocation"
+ type="xs:int">
<xs:annotation>
- <xs:documentation>horizontal position of split pane divider
+ <xs:documentation>
+ horizontal position of
+ split pane divider
</xs:documentation>
</xs:annotation>
</xs:attribute>
- <xs:attribute name="selectedRna" type="xs:int">
+ <xs:attribute name="selectedRna"
+ type="xs:int">
<xs:annotation>
- <xs:documentation>Index of the selected structure in the
- viewer panel
+ <xs:documentation>
+ Index of the selected
+ structure in the viewer
+ panel
</xs:documentation>
</xs:annotation>
</xs:attribute>
git://source.jalview.org / jalview.git / blobdiff