updated schema to store and recover belowAlignment and calcId for JAL-1109 and JAL...

[jalview.git] / schemas / vamsas.xsd

diff --git a/schemas/vamsas.xsd b/schemas/vamsas.xsd
index 0843deb..9d4b679 100755 (executable)
--- a/schemas/vamsas.xsd
+++ b/schemas/vamsas.xsd
@@ -214,6 +214,11 @@
                        <xs:attribute name="autoCalculated" type="xs:boolean" use="optional" default="false">
                        <xs:annotation><xs:documentation>is an autocalculated annotation row</xs:documentation>
                        </xs:annotation></xs:attribute>
+                       <xs:attribute name="belowAlignment" type="xs:boolean" use="optional" default="true">
+                       <xs:annotation><xs:documentation>is to be shown below the alignment - introduced in Jalview 2.8 for visualizing T-COFFEE alignment scores</xs:documentation></xs:annotation></xs:attribute>
+                       <xs:attribute name="calcId" type="xs:string" use="optional">
+                       <xs:annotation><xs:documentation>Optional string identifier used to group sets of annotation produced by a particular calculation. Values are opaque strings but have semantic meaning to Jalview's renderer, data importer and calculation system.</xs:documentation></xs:annotation>
+                       </xs:attribute>
                </xs:complexType>
        </xs:element>   
        <xs:element name="SequenceSet">