file format enum wip changes

[jalview.git] / src / MCview / PDBfile.java

diff --git a/src/MCview/PDBfile.java b/src/MCview/PDBfile.java
index 9acc2e7..6da867d 100755 (executable)
--- a/src/MCview/PDBfile.java
+++ b/src/MCview/PDBfile.java
@@ -24,6 +24,7 @@ import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.DBRefSource;
 import jalview.datamodel.SequenceI;
 import jalview.io.FileParse;
+import jalview.io.DataSourceType;
 import jalview.io.StructureFile;
 import jalview.structure.StructureImportSettings;
 import jalview.util.MessageManager;
@@ -47,10 +48,11 @@ public class PDBfile extends StructureFile
   }
 
   public PDBfile(boolean addAlignmentAnnotations, boolean predictSecStr,
-          boolean externalSecStr, String dataObject, String protocol)
+          boolean externalSecStr, String dataObject,
+          DataSourceType sourceType)
           throws IOException
   {
-    super(false, dataObject, protocol);
+    super(false, dataObject, sourceType);
     addSettings(addAlignmentAnnotations, predictSecStr, externalSecStr);
     doParse();
   }