for (String chimObjName : names)
{
// get or open the corresponding models if they already exist
- List<ChimeraModel> currentModels = chimeraManager
- .getChimeraModels(chimObjName, type);
+ List<ChimeraModel> currentModels = chimeraManager.getChimeraModels(
+ chimObjName, type);
if (currentModels.size() == 0)
{
// open and return models
// Get the corresponding "real" model
if (chimeraManager.hasChimeraModel(modelNumber, subModelNumber))
{
- ChimeraModel dataModel = chimeraManager
- .getChimeraModel(modelNumber, subModelNumber);
- if (dataModel.getResidueCount() == selectedModel.getResidueCount()
- || dataModel
- .getModelType() == StructureManager.ModelType.SMILES)
+ ChimeraModel dataModel = chimeraManager.getChimeraModel(
+ modelNumber, subModelNumber);
+ if (dataModel.getResidueCount() == selectedModel
+ .getResidueCount()
+ || dataModel.getModelType() == StructureManager.ModelType.SMILES)
{
// Select the entire model
addChimSelection(dataModel);
{
for (ChimeraChain selectedChain : selectedModel.getChains())
{
- ChimeraChain dataChain = dataModel
- .getChain(selectedChain.getChainId());
+ ChimeraChain dataChain = dataModel.getChain(selectedChain
+ .getChainId());
if (selectedChain.getResidueCount() == dataChain
.getResidueCount())
{
pathList.add("/usr/local/chimera/bin/chimera");
pathList.add("/usr/local/bin/chimera");
pathList.add("/usr/bin/chimera");
- pathList.add(System.getProperty("user.home") + "/opt/bin/chimera");
}
else if (os.startsWith("Windows"))
{