*
* This file was auto-generated from WSDL
* by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
- */
-
+ */\r
+\r
/*
* Jalview - A Sequence Alignment Editor and Viewer
* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/
-
-package ext.vamsas;
-
-public class JpredSoapBindingStub extends org.apache.axis.client.Stub implements ext.vamsas.JPredWS {
- private java.util.Vector cachedSerClasses = new java.util.Vector();
- private java.util.Vector cachedSerQNames = new java.util.Vector();
- private java.util.Vector cachedSerFactories = new java.util.Vector();
- private java.util.Vector cachedDeserFactories = new java.util.Vector();
-
- static org.apache.axis.description.OperationDesc [] _operations;
-
- static {
- _operations = new org.apache.axis.description.OperationDesc[4];
- _initOperationDesc1();
- }
-
- private static void _initOperationDesc1(){
- org.apache.axis.description.OperationDesc oper;
- oper = new org.apache.axis.description.OperationDesc();
- oper.setName("predict");
- oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"), new javax.xml.namespace.QName("http://dataTypes.vamsas", "Sequence"), ext.vamsas.Sequence.class, org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
- oper.setReturnClass(java.lang.String.class);
- oper.setReturnQName(new javax.xml.namespace.QName("vamsas", "predictReturn"));
- oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
- oper.setUse(org.apache.axis.constants.Use.LITERAL);
- _operations[0] = oper;
-
- oper = new org.apache.axis.description.OperationDesc();
- oper.setName("predictOnMsa");
- oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"), new javax.xml.namespace.QName("http://dataTypes.vamsas", "Msfalignment"), ext.vamsas.Msfalignment.class, org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
- oper.setReturnClass(java.lang.String.class);
- oper.setReturnQName(new javax.xml.namespace.QName("vamsas", "predictOnMsaReturn"));
- oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
- oper.setUse(org.apache.axis.constants.Use.LITERAL);
- _operations[1] = oper;
-
- oper = new org.apache.axis.description.OperationDesc();
- oper.setName("getpredict");
- oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.setReturnType(new javax.xml.namespace.QName("http://dataTypes.vamsas", "Secstructpred"));
- oper.setReturnClass(ext.vamsas.Secstructpred.class);
- oper.setReturnQName(new javax.xml.namespace.QName("vamsas", "getpredictReturn"));
- oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
- oper.setUse(org.apache.axis.constants.Use.LITERAL);
- _operations[2] = oper;
-
- oper = new org.apache.axis.description.OperationDesc();
- oper.setName("getresult");
- oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.setReturnType(new javax.xml.namespace.QName("http://dataTypes.vamsas", "JpredResult"));
- oper.setReturnClass(ext.vamsas.JpredResult.class);
- oper.setReturnQName(new javax.xml.namespace.QName("vamsas", "getresultReturn"));
- oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
- oper.setUse(org.apache.axis.constants.Use.LITERAL);
- _operations[3] = oper;
-
- }
-
- public JpredSoapBindingStub() throws org.apache.axis.AxisFault {
- this(null);
- }
-
- public JpredSoapBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
- this(service);
- super.cachedEndpoint = endpointURL;
- }
-
- public JpredSoapBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
- if (service == null) {
- super.service = new org.apache.axis.client.Service();
- } else {
- super.service = service;
- }
- java.lang.Class cls;
- javax.xml.namespace.QName qName;
- java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
- java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
- java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
- java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
- java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
- java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
- java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
- java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
- java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
- java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
- qName = new javax.xml.namespace.QName("http://dataTypes.vamsas", "Sequence");
- cachedSerQNames.add(qName);
- cls = ext.vamsas.Sequence.class;
- cachedSerClasses.add(cls);
- cachedSerFactories.add(beansf);
- cachedDeserFactories.add(beandf);
-
- qName = new javax.xml.namespace.QName("http://dataTypes.vamsas", "Secstructpred");
- cachedSerQNames.add(qName);
- cls = ext.vamsas.Secstructpred.class;
- cachedSerClasses.add(cls);
- cachedSerFactories.add(beansf);
- cachedDeserFactories.add(beandf);
-
- qName = new javax.xml.namespace.QName("http://dataTypes.vamsas", "Msfalignment");
- cachedSerQNames.add(qName);
- cls = ext.vamsas.Msfalignment.class;
- cachedSerClasses.add(cls);
- cachedSerFactories.add(beansf);
- cachedDeserFactories.add(beandf);
-
- qName = new javax.xml.namespace.QName("http://dataTypes.vamsas", "JpredResult");
- cachedSerQNames.add(qName);
- cls = ext.vamsas.JpredResult.class;
- cachedSerClasses.add(cls);
- cachedSerFactories.add(beansf);
- cachedDeserFactories.add(beandf);
-
- qName = new javax.xml.namespace.QName("http://dataTypes.vamsas", "Result");
- cachedSerQNames.add(qName);
- cls = ext.vamsas.Result.class;
- cachedSerClasses.add(cls);
- cachedSerFactories.add(beansf);
- cachedDeserFactories.add(beandf);
-
- }
-
- protected org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {
- try {
- org.apache.axis.client.Call _call =
- (org.apache.axis.client.Call) super.service.createCall();
- if (super.maintainSessionSet) {
- _call.setMaintainSession(super.maintainSession);
- }
- if (super.cachedUsername != null) {
- _call.setUsername(super.cachedUsername);
- }
- if (super.cachedPassword != null) {
- _call.setPassword(super.cachedPassword);
- }
- if (super.cachedEndpoint != null) {
- _call.setTargetEndpointAddress(super.cachedEndpoint);
- }
- if (super.cachedTimeout != null) {
- _call.setTimeout(super.cachedTimeout);
- }
- if (super.cachedPortName != null) {
- _call.setPortName(super.cachedPortName);
- }
- java.util.Enumeration keys = super.cachedProperties.keys();
- while (keys.hasMoreElements()) {
- java.lang.String key = (java.lang.String) keys.nextElement();
- _call.setProperty(key, super.cachedProperties.get(key));
- }
- // All the type mapping information is registered
- // when the first call is made.
- // The type mapping information is actually registered in
- // the TypeMappingRegistry of the service, which
- // is the reason why registration is only needed for the first call.
- synchronized (this) {
- if (firstCall()) {
- // must set encoding style before registering serializers
- _call.setEncodingStyle(null);
- for (int i = 0; i < cachedSerFactories.size(); ++i) {
- java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
- javax.xml.namespace.QName qName =
- (javax.xml.namespace.QName) cachedSerQNames.get(i);
- java.lang.Class sf = (java.lang.Class)
- cachedSerFactories.get(i);
- java.lang.Class df = (java.lang.Class)
- cachedDeserFactories.get(i);
- _call.registerTypeMapping(cls, qName, sf, df, false);
- }
- }
- }
- return _call;
- }
- catch (java.lang.Throwable _t) {
- throw new org.apache.axis.AxisFault("Failure trying to get the Call object", _t);
- }
- }
-
- public java.lang.String predict(ext.vamsas.Sequence in0) throws java.rmi.RemoteException {
- if (super.cachedEndpoint == null) {
- throw new org.apache.axis.NoEndPointException();
- }
- org.apache.axis.client.Call _call = createCall();
- _call.setOperation(_operations[0]);
- _call.setUseSOAPAction(true);
- _call.setSOAPActionURI("");
- _call.setEncodingStyle(null);
- _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
- _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
- _call.setOperationName(new javax.xml.namespace.QName("vamsas", "predict"));
-
- setRequestHeaders(_call);
- setAttachments(_call);
- java.lang.Object _resp = _call.invoke(new java.lang.Object[] {in0});
-
- if (_resp instanceof java.rmi.RemoteException) {
- throw (java.rmi.RemoteException)_resp;
- }
- else {
- extractAttachments(_call);
- try {
- return (java.lang.String) _resp;
- } catch (java.lang.Exception _exception) {
- return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
- }
- }
- }
-
- public java.lang.String predictOnMsa(ext.vamsas.Msfalignment in0) throws java.rmi.RemoteException {
- if (super.cachedEndpoint == null) {
- throw new org.apache.axis.NoEndPointException();
- }
- org.apache.axis.client.Call _call = createCall();
- _call.setOperation(_operations[1]);
- _call.setUseSOAPAction(true);
- _call.setSOAPActionURI("");
- _call.setEncodingStyle(null);
- _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
- _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
- _call.setOperationName(new javax.xml.namespace.QName("vamsas", "predictOnMsa"));
-
- setRequestHeaders(_call);
- setAttachments(_call);
- java.lang.Object _resp = _call.invoke(new java.lang.Object[] {in0});
-
- if (_resp instanceof java.rmi.RemoteException) {
- throw (java.rmi.RemoteException)_resp;
- }
- else {
- extractAttachments(_call);
- try {
- return (java.lang.String) _resp;
- } catch (java.lang.Exception _exception) {
- return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
- }
- }
- }
-
- public ext.vamsas.Secstructpred getpredict(java.lang.String in0) throws java.rmi.RemoteException {
- if (super.cachedEndpoint == null) {
- throw new org.apache.axis.NoEndPointException();
- }
- org.apache.axis.client.Call _call = createCall();
- _call.setOperation(_operations[2]);
- _call.setUseSOAPAction(true);
- _call.setSOAPActionURI("");
- _call.setEncodingStyle(null);
- _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
- _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
- _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getpredict"));
-
- setRequestHeaders(_call);
- setAttachments(_call);
- java.lang.Object _resp = _call.invoke(new java.lang.Object[] {in0});
-
- if (_resp instanceof java.rmi.RemoteException) {
- throw (java.rmi.RemoteException)_resp;
- }
- else {
- extractAttachments(_call);
- try {
- return (ext.vamsas.Secstructpred) _resp;
- } catch (java.lang.Exception _exception) {
- return (ext.vamsas.Secstructpred) org.apache.axis.utils.JavaUtils.convert(_resp, ext.vamsas.Secstructpred.class);
- }
- }
- }
-
- public ext.vamsas.JpredResult getresult(java.lang.String in0) throws java.rmi.RemoteException {
- if (super.cachedEndpoint == null) {
- throw new org.apache.axis.NoEndPointException();
- }
- org.apache.axis.client.Call _call = createCall();
- _call.setOperation(_operations[3]);
- _call.setUseSOAPAction(true);
- _call.setSOAPActionURI("");
- _call.setEncodingStyle(null);
- _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
- _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
- _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getresult"));
-
- setRequestHeaders(_call);
- setAttachments(_call);
- java.lang.Object _resp = _call.invoke(new java.lang.Object[] {in0});
-
- if (_resp instanceof java.rmi.RemoteException) {
- throw (java.rmi.RemoteException)_resp;
- }
- else {
- extractAttachments(_call);
- try {
- return (ext.vamsas.JpredResult) _resp;
- } catch (java.lang.Exception _exception) {
- return (ext.vamsas.JpredResult) org.apache.axis.utils.JavaUtils.convert(_resp, ext.vamsas.JpredResult.class);
- }
- }
- }
-
-}
+*/\r
+package ext.vamsas;\r
+\r
+public class JpredSoapBindingStub extends org.apache.axis.client.Stub\r
+ implements ext.vamsas.JPredWS {\r
+ static org.apache.axis.description.OperationDesc[] _operations;\r
+\r
+ static {\r
+ _operations = new org.apache.axis.description.OperationDesc[4];\r
+ _initOperationDesc1();\r
+ }\r
+\r
+ private java.util.Vector cachedSerClasses = new java.util.Vector();\r
+ private java.util.Vector cachedSerQNames = new java.util.Vector();\r
+ private java.util.Vector cachedSerFactories = new java.util.Vector();\r
+ private java.util.Vector cachedDeserFactories = new java.util.Vector();\r
+\r
+ public JpredSoapBindingStub() throws org.apache.axis.AxisFault {\r
+ this(null);\r
+ }\r
+\r
+ public JpredSoapBindingStub(java.net.URL endpointURL,\r
+ javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {\r
+ this(service);\r
+ super.cachedEndpoint = endpointURL;\r
+ }\r
+\r
+ public JpredSoapBindingStub(javax.xml.rpc.Service service)\r
+ throws org.apache.axis.AxisFault {\r
+ if (service == null) {\r
+ super.service = new org.apache.axis.client.Service();\r
+ } else {\r
+ super.service = service;\r
+ }\r
+\r
+ java.lang.Class cls;\r
+ javax.xml.namespace.QName qName;\r
+ java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;\r
+ java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;\r
+ java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;\r
+ java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;\r
+ java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;\r
+ java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;\r
+ java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;\r
+ java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;\r
+ java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;\r
+ java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;\r
+ qName = new javax.xml.namespace.QName("http://dataTypes.vamsas",\r
+ "Sequence");\r
+ cachedSerQNames.add(qName);\r
+ cls = ext.vamsas.Sequence.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+\r
+ qName = new javax.xml.namespace.QName("http://dataTypes.vamsas",\r
+ "Secstructpred");\r
+ cachedSerQNames.add(qName);\r
+ cls = ext.vamsas.Secstructpred.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+\r
+ qName = new javax.xml.namespace.QName("http://dataTypes.vamsas",\r
+ "Msfalignment");\r
+ cachedSerQNames.add(qName);\r
+ cls = ext.vamsas.Msfalignment.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+\r
+ qName = new javax.xml.namespace.QName("http://dataTypes.vamsas",\r
+ "JpredResult");\r
+ cachedSerQNames.add(qName);\r
+ cls = ext.vamsas.JpredResult.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+\r
+ qName = new javax.xml.namespace.QName("http://dataTypes.vamsas",\r
+ "Result");\r
+ cachedSerQNames.add(qName);\r
+ cls = ext.vamsas.Result.class;\r
+ cachedSerClasses.add(cls);\r
+ cachedSerFactories.add(beansf);\r
+ cachedDeserFactories.add(beandf);\r
+ }\r
+\r
+ private static void _initOperationDesc1() {\r
+ org.apache.axis.description.OperationDesc oper;\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("predict");\r
+ oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"),\r
+ new javax.xml.namespace.QName("http://dataTypes.vamsas", "Sequence"),\r
+ ext.vamsas.Sequence.class,\r
+ org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.setReturnType(new javax.xml.namespace.QName(\r
+ "http://www.w3.org/2001/XMLSchema", "string"));\r
+ oper.setReturnClass(java.lang.String.class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("vamsas",\r
+ "predictReturn"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[0] = oper;\r
+\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("predictOnMsa");\r
+ oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"),\r
+ new javax.xml.namespace.QName("http://dataTypes.vamsas",\r
+ "Msfalignment"), ext.vamsas.Msfalignment.class,\r
+ org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.setReturnType(new javax.xml.namespace.QName(\r
+ "http://www.w3.org/2001/XMLSchema", "string"));\r
+ oper.setReturnClass(java.lang.String.class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("vamsas",\r
+ "predictOnMsaReturn"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[1] = oper;\r
+\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("getpredict");\r
+ oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"),\r
+ new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",\r
+ "string"), java.lang.String.class,\r
+ org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.setReturnType(new javax.xml.namespace.QName(\r
+ "http://dataTypes.vamsas", "Secstructpred"));\r
+ oper.setReturnClass(ext.vamsas.Secstructpred.class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("vamsas",\r
+ "getpredictReturn"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[2] = oper;\r
+\r
+ oper = new org.apache.axis.description.OperationDesc();\r
+ oper.setName("getresult");\r
+ oper.addParameter(new javax.xml.namespace.QName("vamsas", "in0"),\r
+ new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",\r
+ "string"), java.lang.String.class,\r
+ org.apache.axis.description.ParameterDesc.IN, false, false);\r
+ oper.setReturnType(new javax.xml.namespace.QName(\r
+ "http://dataTypes.vamsas", "JpredResult"));\r
+ oper.setReturnClass(ext.vamsas.JpredResult.class);\r
+ oper.setReturnQName(new javax.xml.namespace.QName("vamsas",\r
+ "getresultReturn"));\r
+ oper.setStyle(org.apache.axis.constants.Style.WRAPPED);\r
+ oper.setUse(org.apache.axis.constants.Use.LITERAL);\r
+ _operations[3] = oper;\r
+ }\r
+\r
+ protected org.apache.axis.client.Call createCall()\r
+ throws java.rmi.RemoteException {\r
+ try {\r
+ org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service.createCall();\r
+\r
+ if (super.maintainSessionSet) {\r
+ _call.setMaintainSession(super.maintainSession);\r
+ }\r
+\r
+ if (super.cachedUsername != null) {\r
+ _call.setUsername(super.cachedUsername);\r
+ }\r
+\r
+ if (super.cachedPassword != null) {\r
+ _call.setPassword(super.cachedPassword);\r
+ }\r
+\r
+ if (super.cachedEndpoint != null) {\r
+ _call.setTargetEndpointAddress(super.cachedEndpoint);\r
+ }\r
+\r
+ if (super.cachedTimeout != null) {\r
+ _call.setTimeout(super.cachedTimeout);\r
+ }\r
+\r
+ if (super.cachedPortName != null) {\r
+ _call.setPortName(super.cachedPortName);\r
+ }\r
+\r
+ java.util.Enumeration keys = super.cachedProperties.keys();\r
+\r
+ while (keys.hasMoreElements()) {\r
+ java.lang.String key = (java.lang.String) keys.nextElement();\r
+ _call.setProperty(key, super.cachedProperties.get(key));\r
+ }\r
+\r
+ // All the type mapping information is registered\r
+ // when the first call is made.\r
+ // The type mapping information is actually registered in\r
+ // the TypeMappingRegistry of the service, which\r
+ // is the reason why registration is only needed for the first call.\r
+ synchronized (this) {\r
+ if (firstCall()) {\r
+ // must set encoding style before registering serializers\r
+ _call.setEncodingStyle(null);\r
+\r
+ for (int i = 0; i < cachedSerFactories.size(); ++i) {\r
+ java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);\r
+ javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames.get(i);\r
+ java.lang.Class sf = (java.lang.Class) cachedSerFactories.get(i);\r
+ java.lang.Class df = (java.lang.Class) cachedDeserFactories.get(i);\r
+ _call.registerTypeMapping(cls, qName, sf, df, false);\r
+ }\r
+ }\r
+ }\r
+\r
+ return _call;\r
+ } catch (java.lang.Throwable _t) {\r
+ throw new org.apache.axis.AxisFault("Failure trying to get the Call object",\r
+ _t);\r
+ }\r
+ }\r
+\r
+ public java.lang.String predict(ext.vamsas.Sequence in0)\r
+ throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[0]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,\r
+ Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,\r
+ Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("vamsas", "predict"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] { in0 });\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException) _resp;\r
+ } else {\r
+ extractAttachments(_call);\r
+\r
+ try {\r
+ return (java.lang.String) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp,\r
+ java.lang.String.class);\r
+ }\r
+ }\r
+ }\r
+\r
+ public java.lang.String predictOnMsa(ext.vamsas.Msfalignment in0)\r
+ throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[1]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,\r
+ Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,\r
+ Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("vamsas",\r
+ "predictOnMsa"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] { in0 });\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException) _resp;\r
+ } else {\r
+ extractAttachments(_call);\r
+\r
+ try {\r
+ return (java.lang.String) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp,\r
+ java.lang.String.class);\r
+ }\r
+ }\r
+ }\r
+\r
+ public ext.vamsas.Secstructpred getpredict(java.lang.String in0)\r
+ throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[2]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,\r
+ Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,\r
+ Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("vamsas",\r
+ "getpredict"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] { in0 });\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException) _resp;\r
+ } else {\r
+ extractAttachments(_call);\r
+\r
+ try {\r
+ return (ext.vamsas.Secstructpred) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (ext.vamsas.Secstructpred) org.apache.axis.utils.JavaUtils.convert(_resp,\r
+ ext.vamsas.Secstructpred.class);\r
+ }\r
+ }\r
+ }\r
+\r
+ public ext.vamsas.JpredResult getresult(java.lang.String in0)\r
+ throws java.rmi.RemoteException {\r
+ if (super.cachedEndpoint == null) {\r
+ throw new org.apache.axis.NoEndPointException();\r
+ }\r
+\r
+ org.apache.axis.client.Call _call = createCall();\r
+ _call.setOperation(_operations[3]);\r
+ _call.setUseSOAPAction(true);\r
+ _call.setSOAPActionURI("");\r
+ _call.setEncodingStyle(null);\r
+ _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,\r
+ Boolean.FALSE);\r
+ _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,\r
+ Boolean.FALSE);\r
+ _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
+ _call.setOperationName(new javax.xml.namespace.QName("vamsas",\r
+ "getresult"));\r
+\r
+ setRequestHeaders(_call);\r
+ setAttachments(_call);\r
+\r
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] { in0 });\r
+\r
+ if (_resp instanceof java.rmi.RemoteException) {\r
+ throw (java.rmi.RemoteException) _resp;\r
+ } else {\r
+ extractAttachments(_call);\r
+\r
+ try {\r
+ return (ext.vamsas.JpredResult) _resp;\r
+ } catch (java.lang.Exception _exception) {\r
+ return (ext.vamsas.JpredResult) org.apache.axis.utils.JavaUtils.convert(_resp,\r
+ ext.vamsas.JpredResult.class);\r
+ }\r
+ }\r
+ }\r
+}\r
git://source.jalview.org / jalview.git / blobdiff