JAL-4090 JAL-1551 spotlessApply

[jalview.git] / src / jalview / analysis / AlignSeq.java

diff --git a/src/jalview/analysis/AlignSeq.java b/src/jalview/analysis/AlignSeq.java
index e1d5669..36d2482 100755 (executable)
--- a/src/jalview/analysis/AlignSeq.java
+++ b/src/jalview/analysis/AlignSeq.java
@@ -891,7 +891,7 @@ public class AlignSeq
       }
 
       // ignore case differences
-      if (allowmismatch || (c1 == c2) || (Math.abs(c2-c1)==('a'-'A')))
+      if (allowmismatch || (c1 == c2) || (Math.abs(c2 - c1) == ('a' - 'A')))
       {
         // extend mapping interval
         if (lp1 + 1 != alignpos || lp2 + 1 != pdbpos)
@@ -983,7 +983,8 @@ public class AlignSeq
             bestm = msq;
           }
         }
-        // jalview.bin.Console.outPrintln("Best Score for " + (matches.size() + 1) + " :"
+        // jalview.bin.Console.outPrintln("Best Score for " + (matches.size() +
+        // 1) + " :"
         // + bestscore);
         matches.add(bestm);
         aligns.add(bestaseq);