if (tmp.size() != nSeq)
{
- jalview.bin.Console.errPrintln("WARNING: tmp.size()=" + tmp.size() + " != nseq="
- + nSeq
+ jalview.bin.Console.errPrintln("WARNING: tmp.size()=" + tmp.size()
+ + " != nseq=" + nSeq
+ " in getOrderByTree - tree contains sequences not in alignment");
}
}
int featureCount = feats[i] == null ? 0
: ((SequenceFeature[]) feats[i]).length;
scores[i] = featureCount;
- // jalview.bin.Console.errPrintln("Sorting on Density: seq "+seqs[i].getName()+
+ // jalview.bin.Console.errPrintln("Sorting on Density: seq
+ // "+seqs[i].getName()+
// " Feats: "+featureCount+" Score : "+scores[i]);
}
QuickSort.sortByDouble(scores, seqs, sortByFeatureAscending);