Merge branch 'develop' into bug/JAL-4421_customise_volume_name_of_DMG_installers

[jalview.git] / src / jalview / analysis / ConnectivityException.java

diff --git a/src/jalview/analysis/ConnectivityException.java b/src/jalview/analysis/ConnectivityException.java
new file mode 100644 (file)
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--- /dev/null
+++ b/src/jalview/analysis/ConnectivityException.java
@@ -0,0 +1,57 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.analysis;
+
+public class ConnectivityException extends RuntimeException
+{
+  private String sequence;
+  private int connection;
+  private byte dim;
+
+  public ConnectivityException(String sequence, int connection, byte dim)
+  {
+    this("Insufficient number of connections", sequence, connection, dim);
+  }
+
+  public ConnectivityException(String message, String sequence, int connection, byte dim)
+  {
+    super(String.format("%s for %s (%d, should be %d or more)", message, sequence, connection, dim));
+    this.sequence = sequence;
+    this.connection = connection;
+    this.dim = dim;
+  }
+
+  public String getSequence()
+  {
+    return sequence;
+  }
+
+  public int getConnection()
+  {
+    return connection;
+  }
+
+  public byte getDim()
+  {
+    return dim;
+  }
+
+}