javadoc

[jalview.git] / src / jalview / analysis / NJTree.java

diff --git a/src/jalview/analysis/NJTree.java b/src/jalview/analysis/NJTree.java
index 4d0bb93..88bb51c 100755 (executable)
--- a/src/jalview/analysis/NJTree.java
+++ b/src/jalview/analysis/NJTree.java
@@ -786,12 +786,12 @@ public class NJTree
   }
 
   /**
-   * DOCUMENT ME!
+   * Search for leaf nodes.
    *
-   * @param node DOCUMENT ME!
-   * @param leaves DOCUMENT ME!
+   * @param node root node to search from
+   * @param leaves Vector of leaves to add leaf node objects too.
    *
-   * @return DOCUMENT ME!
+   * @return Vector of leaf nodes on binary tree
    */
   public Vector findLeaves(SequenceNode node, Vector leaves)
   {
@@ -816,12 +816,12 @@ public class NJTree
   }
 
   /**
-   * DOCUMENT ME!
+   * Find the leaf node with a particular ycount 
    *
-   * @param node DOCUMENT ME!
-   * @param count DOCUMENT ME!
+   * @param node initial point on tree to search from
+   * @param count value to search for
    *
-   * @return DOCUMENT ME!
+   * @return null or the node with ycound=count
    */
   public Object findLeaf(SequenceNode node, int count)
   {
@@ -830,13 +830,8 @@ public class NJTree
     return found;
   }
 
-  /**
-   * DOCUMENT ME!
+  /*#see findLeaf(SequenceNode node, count)
    *
-   * @param node DOCUMENT ME!
-   * @param count DOCUMENT ME!
-   *
-   * @return DOCUMENT ME!
    */
   public Object _findLeaf(SequenceNode node, int count)
   {