JAL-2416 add score model description field for tooltip in PCA panel

[jalview.git] / src / jalview / analysis / scoremodels / SmithWatermanModel.java

diff --git a/src/jalview/analysis/scoremodels/SmithWatermanModel.java b/src/jalview/analysis/scoremodels/SmithWatermanModel.java
index eec08ed..190b88f 100644 (file)
--- a/src/jalview/analysis/scoremodels/SmithWatermanModel.java
+++ b/src/jalview/analysis/scoremodels/SmithWatermanModel.java
@@ -37,6 +37,15 @@ public class SmithWatermanModel implements SimilarityScoreModelI
 {
   private static final String NAME = "Smith Waterman Score";
 
+  private String description;
+
+  /**
+   * Constructor
+   */
+  public SmithWatermanModel()
+  {
+  }
+
   @Override
   public MatrixI findSimilarities(AlignmentView seqData,
           SimilarityParamsI options)
@@ -88,8 +97,8 @@ public class SmithWatermanModel implements SimilarityScoreModelI
   }
 
   @Override
-  public String toString()
+  public String getDescription()
   {
-    return "Score between two sequences aligned with Smith Waterman with default Peptide/Nucleotide matrix";
+    return description;
   }
 }