JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix delegate of

[jalview.git] / src / jalview / api / analysis / ScoreModelI.java

diff --git a/src/jalview/api/analysis/ScoreModelI.java b/src/jalview/api/analysis/ScoreModelI.java
deleted file mode 100644 (file)
index 332bba5..0000000
--- a/src/jalview/api/analysis/ScoreModelI.java
+++ /dev/null
@@ -1,48 +0,0 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *  
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License
- * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- */
-package jalview.api.analysis;
-
-import jalview.datamodel.AlignmentView;
-
-public interface ScoreModelI
-{
-
-  float[][] findDistances(AlignmentView seqData);
-
-  String getName();
-
-  /**
-   * Answers true if this model is applicable for nucleotide data (so should be
-   * shown in menus in that context)
-   * 
-   * @return
-   */
-  boolean isDNA();
-
-  /**
-   * Answers true if this model is applicable for peptide data (so should be
-   * shown in menus in that context)
-   * 
-   * @return
-   */
-  boolean isProtein();
-
-}