import java.awt.event.WindowAdapter;
import java.awt.event.WindowEvent;
import java.io.IOException;
+import java.io.UnsupportedEncodingException;
import java.net.URL;
import java.net.URLEncoder;
import java.util.Arrays;
{
features = formatter.printJalviewFormat(
viewport.getAlignment().getSequencesArray(),
- alignPanel.getFeatureRenderer(), true);
+ alignPanel.getFeatureRenderer(), true, false);
}
else
{
features = formatter.printGffFormat(viewport.getAlignment()
- .getSequencesArray(), alignPanel.getFeatureRenderer(), true);
+ .getSequencesArray(), alignPanel.getFeatureRenderer(), true,
+ false);
}
if (displayTextbox)
try
{
new URL(url);
- url = URLEncoder.encode(url);
+ url = URLEncoder.encode(url, "UTF-8");
}
/*
* When we finally deprecate 1.1 compatibility, we can start to use
{
url = viewport.applet.getCodeBase() + url;
}
+ catch (UnsupportedEncodingException ex)
+ {
+ System.err.println(
+ "WARNING = IMPLEMENTATION ERROR - UNSUPPORTED ENCODING EXCEPTION FOR "
+ + url);
+ ex.printStackTrace();
+ }
return url;
}
* without an additional javascript library to exchange messages between the
* distinct applets. See http://issues.jalview.org/browse/JAL-621
*
- * @param viewer
+ * @param jmolViewer
* JmolViewer instance
* @param sequenceIds
* - sequence Ids to search for associations