Use paintAlignment

[jalview.git] / src / jalview / appletgui / AnnotationLabels.java

diff --git a/src/jalview/appletgui/AnnotationLabels.java b/src/jalview/appletgui/AnnotationLabels.java
index bf6d38d..cb17e64 100755 (executable)
--- a/src/jalview/appletgui/AnnotationLabels.java
+++ b/src/jalview/appletgui/AnnotationLabels.java
@@ -148,7 +148,7 @@ public class AnnotationLabels
     ap.annotationPanel.adjustPanelHeight();\r
     setSize(getSize().width, ap.annotationPanel.getSize().height);\r
     ap.validate();\r
-    ap.repaint();\r
+    ap.paintAlignment(true);\r
   }\r
 \r
   public void mouseMoved(MouseEvent evt)\r
@@ -224,7 +224,7 @@ public class AnnotationLabels
         public void itemStateChanged(ItemEvent e)\r
         {\r
           ap.av.setIgnoreGapsConsensus(cbmi.getState());\r
-          ap.repaint();\r
+          ap.paintAlignment(true);\r
         }\r
       });\r
       pop.add(cbmi);\r