JAL-1517 source formatting

[jalview.git] / src / jalview / appletgui / AppletJmol.java

diff --git a/src/jalview/appletgui/AppletJmol.java b/src/jalview/appletgui/AppletJmol.java
index 480cfd1..3d1d0fb 100644 (file)
--- a/src/jalview/appletgui/AppletJmol.java
+++ b/src/jalview/appletgui/AppletJmol.java
@@ -47,35 +47,47 @@ public class AppletJmol extends EmbmenuFrame implements
 
   Menu helpMenu = new Menu(MessageManager.getString("action.help"));
 
-  MenuItem mappingMenuItem = new MenuItem(MessageManager.getString("label.view_mapping"));
+  MenuItem mappingMenuItem = new MenuItem(
+          MessageManager.getString("label.view_mapping"));
 
-  CheckboxMenuItem seqColour = new CheckboxMenuItem(MessageManager.getString("action.by_sequence"), true);
+  CheckboxMenuItem seqColour = new CheckboxMenuItem(
+          MessageManager.getString("action.by_sequence"), true);
 
-  CheckboxMenuItem jmolColour = new CheckboxMenuItem(MessageManager.getString("action.using_jmol"), false);
+  CheckboxMenuItem jmolColour = new CheckboxMenuItem(
+          MessageManager.getString("action.using_jmol"), false);
 
   MenuItem chain = new MenuItem(MessageManager.getString("action.by_chain"));
 
-  MenuItem charge = new MenuItem(MessageManager.getString("label.charge_cysteine"));
+  MenuItem charge = new MenuItem(
+          MessageManager.getString("label.charge_cysteine"));
 
   MenuItem zappo = new MenuItem(MessageManager.getString("label.zappo"));
 
   MenuItem taylor = new MenuItem(MessageManager.getString("label.taylor"));
 
-  MenuItem hydro = new MenuItem(MessageManager.getString("label.hydrophobicity"));
+  MenuItem hydro = new MenuItem(
+          MessageManager.getString("label.hydrophobicity"));
 
-  MenuItem helix = new MenuItem(MessageManager.getString("label.helix_propensity"));
+  MenuItem helix = new MenuItem(
+          MessageManager.getString("label.helix_propensity"));
 
-  MenuItem strand = new MenuItem(MessageManager.getString("label.strand_propensity"));
+  MenuItem strand = new MenuItem(
+          MessageManager.getString("label.strand_propensity"));
 
-  MenuItem turn = new MenuItem(MessageManager.getString("label.turn_propensity"));
+  MenuItem turn = new MenuItem(
+          MessageManager.getString("label.turn_propensity"));
 
-  MenuItem buried = new MenuItem(MessageManager.getString("label.buried_index"));
+  MenuItem buried = new MenuItem(
+          MessageManager.getString("label.buried_index"));
 
-  MenuItem purinepyrimidine = new MenuItem(MessageManager.getString("label.purine_pyrimidine"));
+  MenuItem purinepyrimidine = new MenuItem(
+          MessageManager.getString("label.purine_pyrimidine"));
 
-  MenuItem user = new MenuItem(MessageManager.getString("label.user_defined_colours"));
+  MenuItem user = new MenuItem(
+          MessageManager.getString("label.user_defined_colours"));
 
-  MenuItem jmolHelp = new MenuItem(MessageManager.getString("label.jmol_help"));
+  MenuItem jmolHelp = new MenuItem(
+          MessageManager.getString("label.jmol_help"));
 
   Panel scriptWindow;
 
@@ -400,8 +412,9 @@ public class AppletJmol extends EmbmenuFrame implements
                 .println("Out of memory when trying to create dialog box with sequence-structure mapping.");
         return;
       }
-      jalview.bin.JalviewLite.addFrame(frame, MessageManager.getString("label.pdb_sequence_mapping"),
-              550, 600);
+      jalview.bin.JalviewLite.addFrame(frame,
+              MessageManager.getString("label.pdb_sequence_mapping"), 550,
+              600);
     }
     else if (evt.getSource() == charge)
     {
@@ -619,7 +632,8 @@ public class AppletJmol extends EmbmenuFrame implements
         g.fillRect(0, 0, currentSize.width, currentSize.height);
         g.setColor(Color.white);
         g.setFont(new Font("Verdana", Font.BOLD, 14));
-        g.drawString(MessageManager.getString("label.retrieving_pdb_data"), 20, currentSize.height / 2);
+        g.drawString(MessageManager.getString("label.retrieving_pdb_data"),
+                20, currentSize.height / 2);
       }
       else
       {