// TODO: add in group link parameter
// make a list of label,url pairs
- HashMap<String, String> urlList = new HashMap<String, String>();
+ HashMap<String, String> urlList = new HashMap<>();
if (viewport.applet != null)
{
for (int i = 1; i < 10; i++)
}
lastid = seq;
- alignPanel.paintAlignment(false);
+ alignPanel.paintAlignment(false, false);
}
@Override
}
else
{
- nlinks = new ArrayList<String>();
+ nlinks = new ArrayList<>();
}
for (SequenceFeature sf : sq.getFeatures().getNonPositionalFeatures())
selectSeq(seq);
}
- alignPanel.paintAlignment(false);
+ alignPanel.paintAlignment(false, false);
}
void selectSeq(int seq)
running = false;
}
- alignPanel.paintAlignment(true);
+ alignPanel.paintAlignment(true, false);
try
{
Thread.sleep(100);