Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e' into develop

[jalview.git] / src / jalview / appletgui / OverviewPanel.java

diff --git a/src/jalview/appletgui/OverviewPanel.java b/src/jalview/appletgui/OverviewPanel.java
index 3d5bd1b..89821bc 100755 (executable)
--- a/src/jalview/appletgui/OverviewPanel.java
+++ b/src/jalview/appletgui/OverviewPanel.java
@@ -69,7 +69,6 @@ public class OverviewPanel extends Panel implements Runnable,
     sr.renderGaps = false;
     sr.forOverview = true;
     fr = new FeatureRenderer(av);
-    fr.overview = true;
 
     // scale the initial size of overviewpanel to shape of alignment
     float initialScale = (float) av.getAlignment().getWidth()
@@ -229,10 +228,9 @@ public class OverviewPanel extends Panel implements Runnable,
       return;
     }
 
-    if (av.showSequenceFeatures)
+    if (av.isShowSequenceFeatures())
     {
-      fr.featureGroups = ap.seqPanel.seqCanvas.getFeatureRenderer().featureGroups;
-      fr.featureColours = ap.seqPanel.seqCanvas.getFeatureRenderer().featureColours;
+      fr.transferSettings(ap.seqPanel.seqCanvas.fr);
     }
 
     resizing = true;
@@ -260,7 +258,7 @@ public class OverviewPanel extends Panel implements Runnable,
     int alwidth = av.getAlignment().getWidth();
     int alheight = av.getAlignment().getHeight();
 
-    if (av.showSequenceFeatures)
+    if (av.isShowSequenceFeatures())
     {
       fr.transferSettings(ap.seqPanel.seqCanvas.getFeatureRenderer());
     }
@@ -337,7 +335,7 @@ public class OverviewPanel extends Panel implements Runnable,
         {
           color = sr.getResidueBoxColour(seq, lastcol);
 
-          if (av.showSequenceFeatures)
+          if (av.isShowSequenceFeatures())
           {
             color = fr.findFeatureColour(color, seq, lastcol);
           }