formatting

[jalview.git] / src / jalview / appletgui / RedundancyPanel.java

diff --git a/src/jalview/appletgui/RedundancyPanel.java b/src/jalview/appletgui/RedundancyPanel.java
index 03a9faf..bd4ac64 100755 (executable)
--- a/src/jalview/appletgui/RedundancyPanel.java
+++ b/src/jalview/appletgui/RedundancyPanel.java
@@ -121,7 +121,8 @@ public class RedundancyPanel extends SliderPanel implements Runnable,
 
     height = originalSequences.length;
 
-    redundancy = AlignSeq.computeRedundancyMatrix(originalSequences, omitHidden, start, end, false);
+    redundancy = AlignSeq.computeRedundancyMatrix(originalSequences,
+            omitHidden, start, end, false);
     label.setText("Enter the redundancy threshold");
     slider.setVisible(true);
     applyButton.setEnabled(true);
@@ -193,7 +194,7 @@ public class RedundancyPanel extends SliderPanel implements Runnable,
 
       EditCommand cut = new EditCommand("Remove Redundancy",
               EditCommand.CUT, deleted, 0, width, ap.av.getAlignment());
-      AlignmentI alignment=ap.av.getAlignment();
+      AlignmentI alignment = ap.av.getAlignment();
       for (int i = 0; i < del.size(); i++)
       {
         alignment.deleteSequence(deleted[i]);
@@ -208,8 +209,8 @@ public class RedundancyPanel extends SliderPanel implements Runnable,
       ap.alignFrame.addHistoryItem(cut);
 
       PaintRefresher.Refresh(this, ap.av.getSequenceSetId(), true, true);
-//      ap.av.firePropertyChange("alignment", null, ap.av.getAlignment()
-//              .getSequences());
+      // ap.av.firePropertyChange("alignment", null, ap.av.getAlignment()
+      // .getSequences());
     }
 
   }