JAL-98 JAL-1854 encapsulate 'magic number' threshold 3 in Conservation

[jalview.git] / src / jalview / appletgui / TreeCanvas.java

diff --git a/src/jalview/appletgui/TreeCanvas.java b/src/jalview/appletgui/TreeCanvas.java
index 3b509e5..8292a5a 100755 (executable)
--- a/src/jalview/appletgui/TreeCanvas.java
+++ b/src/jalview/appletgui/TreeCanvas.java
@@ -676,8 +676,8 @@ public class TreeCanvas extends Panel implements MouseListener,
       if (av.getGlobalColourScheme() != null
               && av.getGlobalColourScheme().conservationApplied())
       {
-        Conservation c = new Conservation("Group", 3,
-                sg.getSequences(null), sg.getStartRes(), sg.getEndRes());
+        Conservation c = new Conservation("Group", sg.getSequences(null),
+                sg.getStartRes(), sg.getEndRes());
 
         c.calculate();
         c.verdict(false, av.getConsPercGaps());