apply jalview code style

[jalview.git] / src / jalview / bin / Cache.java

diff --git a/src/jalview/bin/Cache.java b/src/jalview/bin/Cache.java
index 24ef016..d666b01 100755 (executable)
--- a/src/jalview/bin/Cache.java
+++ b/src/jalview/bin/Cache.java
@@ -125,7 +125,8 @@ import org.biojava.dasobert.dasregistry.Das1Source;
  * <li>SHOW_CONSENSUS_LOGO (false) Show consensus annotation row's sequence
  * logo.</li>
  * <li>FOLLOW_SELECTIONS (true) Controls whether a new alignment view should
- * respond to selections made in other alignments containing the same sequences.</li>
+ * respond to selections made in other alignments containing the same sequences.
+ * </li>
  * 
  * <li></li>
  * 
@@ -172,7 +173,7 @@ public class Cache
 
   public static void initLogger()
   {
-    if (log!=null)
+    if (log != null)
     {
       return;
     }
@@ -241,9 +242,7 @@ public class Cache
       System.out.println("Using proxyServer: "
               + getDefault("PROXY_SERVER", null) + " proxyPort: "
               + getDefault("PROXY_PORT", null));
-      System
-              .setProperty("http.proxyHost", getDefault("PROXY_SERVER",
-                      null));
+      System.setProperty("http.proxyHost", getDefault("PROXY_SERVER", null));
       System.setProperty("http.proxyPort", getDefault("PROXY_PORT", null));
     }
 
@@ -253,8 +252,8 @@ public class Cache
     try
     {
       String buildDetails = "jar:".concat(Cache.class.getProtectionDomain()
-              .getCodeSource().getLocation().toString().concat(
-                      "!/.build_properties"));
+              .getCodeSource().getLocation().toString()
+              .concat("!/.build_properties"));
 
       java.net.URL localJarFileURL = new java.net.URL(buildDetails);
 
@@ -609,8 +608,7 @@ public class Cache
                   "com.boxysystems.jgoogleanalytics.FocusPoint");
         } catch (Exception e)
         {
-          log
-                  .debug("com.boxysystems.jgoogleanalytics package is not present - tracking not enabled.");
+          log.debug("com.boxysystems.jgoogleanalytics package is not present - tracking not enabled.");
           tracker = null;
           jgoogleanalyticstracker = null;
           trackerfocus = null;
@@ -654,10 +652,7 @@ public class Cache
         if (log != null)
         {
           if (re != null)
-            log
-                    .debug(
-                            "Caught runtime exception in googletracker init:",
-                            re);
+            log.debug("Caught runtime exception in googletracker init:", re);
           if (ex != null)
             log.warn(
                     "Failed to initialise GoogleTracker for Jalview Desktop with version "