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minor changes
[jalview.git] / src / jalview / bin / Jalview.java
diff --git a/src/jalview/bin/Jalview.java b/src/jalview/bin/Jalview.java
index b6fc7e8..b8f49a2 100755 (executable)
--- a/src/jalview/bin/Jalview.java
+++ b/src/jalview/bin/Jalview.java
@@ -807,8 +807,7 @@ public class Jalview implements ApplicationSingletonI, JalviewJSApi
          * 
          */
         {
-          if (aparser.contains(ArgsParser.NOANNOTATION)
-                  || aparser.contains(ArgsParser.NOANNOTATION2))
+          if (noAnnotation)
           {
             af.getViewport().setShowAnnotation(false);
             if (!af.getViewport().isShowAnnotation())