--- /dev/null
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.datamodel;
+
+import java.util.Iterator;
+import java.util.NoSuchElementException;
+
+/**
+ * An iterator which iterates over all columns or rows in an alignment, whether
+ * hidden or visible.
+ *
+ * @author kmourao
+ *
+ */
+public class AllColsIterator implements Iterator<Integer>
+{
+ private int last;
+
+ private int next;
+
+ private int current;
+
+ public AllColsIterator(int firstcol, int lastcol, HiddenColumns hiddenCols)
+ {
+ last = lastcol;
+ next = firstcol;
+ current = firstcol;
+ }
+
+ @Override
+ public boolean hasNext()
+ {
+ return current + 1 <= last;
+ }
+
+ @Override
+ public Integer next()
+ {
+ if (current + 1 > last)
+ {
+ throw new NoSuchElementException();
+ }
+ current = next;
+ next++;
+
+ return current;
+ }
+
+ @Override
+ public void remove()
+ {
+ throw new UnsupportedOperationException();
+ }
+}
+