-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/\r
+/*\r
+ * Jalview - A Sequence Alignment Editor and Viewer\r
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ *\r
+ * This program is free software; you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License\r
+ * as published by the Free Software Foundation; either version 2\r
+ * of the License, or (at your option) any later version.\r
+ *\r
+ * This program is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
+ * GNU General Public License for more details.\r
+ *\r
+ * You should have received a copy of the GNU General Public License\r
+ * along with this program; if not, write to the Free Software\r
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
+ */\r
package jalview.datamodel;\r
\r
import java.awt.*;\r
\r
+/**\r
+ * DOCUMENT ME!\r
+ *\r
+ * @author $author$\r
+ * @version $Revision$\r
+ */\r
+public class Annotation\r
+{\r
+ /** DOCUMENT ME!! */\r
+ public String displayCharacter = "";\r
\r
-public class Annotation {\r
- public String displayCharacter = "";\r
- public String description = ""; // currently used as mouse over\r
- public char secondaryStructure = ' '; // recognises H and E\r
- public float value;\r
+ /** DOCUMENT ME!! */\r
+ public String description = ""; // currently used as mouse over\r
\r
- // add visual cues here\r
- public Color colour = Color.black;\r
+ /** DOCUMENT ME!! */\r
+ public char secondaryStructure = ' '; // recognises H and E\r
\r
- public Annotation(String displayChar, String desc, char ss, float val) {\r
- displayCharacter = displayChar;\r
- description = desc;\r
- secondaryStructure = ss;\r
- value = val;\r
- }\r
+ /** DOCUMENT ME!! */\r
+ public float value;\r
\r
- public Annotation(String displayChar, String desc, char ss, float val,\r
- Color colour) {\r
- this(displayChar, desc, ss, val);\r
- this.colour = colour;\r
- }\r
+ // add visual cues here\r
+\r
+ /** DOCUMENT ME!! */\r
+ public Color colour = Color.black;\r
+\r
+ /**\r
+ * Creates a new Annotation object.\r
+ *\r
+ * @param displayChar DOCUMENT ME!\r
+ * @param desc DOCUMENT ME!\r
+ * @param ss DOCUMENT ME!\r
+ * @param val DOCUMENT ME!\r
+ */\r
+ public Annotation(String displayChar, String desc, char ss, float val)\r
+ {\r
+ displayCharacter = displayChar;\r
+ description = desc;\r
+ secondaryStructure = ss;\r
+ value = val;\r
+ }\r
+\r
+ /**\r
+ * Creates a new Annotation object.\r
+ *\r
+ * @param displayChar DOCUMENT ME!\r
+ * @param desc DOCUMENT ME!\r
+ * @param ss DOCUMENT ME!\r
+ * @param val DOCUMENT ME!\r
+ * @param colour DOCUMENT ME!\r
+ */\r
+ public Annotation(String displayChar, String desc, char ss, float val,\r
+ Color colour)\r
+ {\r
+ this(displayChar, desc, ss, val);\r
+ this.colour = colour;\r
+ }\r
}\r
git://source.jalview.org / jalview.git / blobdiff