JAL-4158 first attempt at stashing colours for contact matrix groups and allowing...

[jalview.git] / src / jalview / datamodel / ContactMatrixI.java

diff --git a/src/jalview/datamodel/ContactMatrixI.java b/src/jalview/datamodel/ContactMatrixI.java
index 9eabb10..1c169ef 100644 (file)
--- a/src/jalview/datamodel/ContactMatrixI.java
+++ b/src/jalview/datamodel/ContactMatrixI.java
@@ -1,5 +1,6 @@
 package jalview.datamodel;
 
+import java.awt.Color;
 import java.util.Arrays;
 import java.util.BitSet;
 import java.util.List;
@@ -66,4 +67,10 @@ public interface ContactMatrixI
   default double getCutHeight() {
     return 0;
   }
+
+  void updateGroups(List<BitSet> colGroups);
+
+  void setColorForGroup(BitSet bs, Color color);
+
+  default Color getColourForGroup(BitSet bs) { return Color.white;};
 }