JAL-4062 appendResult(seq,start,end) called by structureSelectionManager sweep-search...

[jalview.git] / src / jalview / datamodel / SearchResultMatchI.java

diff --git a/src/jalview/datamodel/SearchResultMatchI.java b/src/jalview/datamodel/SearchResultMatchI.java
index a47ca8b..dedb960 100644 (file)
--- a/src/jalview/datamodel/SearchResultMatchI.java
+++ b/src/jalview/datamodel/SearchResultMatchI.java
@@ -47,4 +47,23 @@ public interface SearchResultMatchI
    */
   int getEnd();
 
+  /**
+   * Answers true if this match is for the given sequence and includes (matches
+   * or encloses) the given start-end range
+   * 
+   * @param seq
+   * @param start
+   * @param end
+   * @return
+   */
+  boolean contains(SequenceI seq, int start, int end);
+
+  /**
+   *
+   * @param seq
+   * @param from - first position to highlight
+   * @param to - last position to highlight (assumed higher than from)
+   * @return true iff from-to intersects or marks positions either side of start/end
+   */
+  boolean adjacent(SequenceI seq, int from, int to);
 }
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