Merge branch 'releases/Release_2_10_0_Branch'

[jalview.git] / src / jalview / datamodel / SequenceCollectionI.java

diff --git a/src/jalview/datamodel/SequenceCollectionI.java b/src/jalview/datamodel/SequenceCollectionI.java
index 7777dce..afd4094 100644 (file)
--- a/src/jalview/datamodel/SequenceCollectionI.java
+++ b/src/jalview/datamodel/SequenceCollectionI.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -29,20 +29,26 @@ public interface SequenceCollectionI
 
   List<SequenceI> getSequences(
           Map<SequenceI, SequenceCollectionI> hiddenReps);
+
   int getWidth();
+
   /**
    * 
    * @return true if getSeqrep doesn't return null
    */
   boolean hasSeqrep();
+
   /**
    * get the reference or representative sequence within this collection
+   * 
    * @return null or the current reference sequence
    */
   SequenceI getSeqrep();
+
   /**
-   * set the reference or representative sequence for this collection. 
-   * Reference is assumed to be present within the collection.
+   * set the reference or representative sequence for this collection. Reference
+   * is assumed to be present within the collection.
+   * 
    * @return
    */
   void setSeqrep(SequenceI refseq);