*/
package jalview.datamodel;
+import jalview.analysis.AAFrequency;
+import jalview.analysis.Conservation;
+import jalview.schemes.ColourSchemeI;
+import jalview.schemes.ResidueProperties;
+import jalview.util.Comparison;
+
import java.awt.Color;
import java.util.ArrayList;
import java.util.Hashtable;
import java.util.Map;
import java.util.Vector;
-import jalview.analysis.AAFrequency;
-import jalview.analysis.Conservation;
-import jalview.schemes.ColourSchemeI;
-import jalview.schemes.ResidueProperties;
-
/**
* Collects a set contiguous ranges on a set of sequences
*
for (int j = 0; j < endRes + 1 && j < seq.getLength(); j++)
{
ch = seq.getCharAt(j);
- if (!jalview.util.Comparison.isGap((ch)))
+ if (!Comparison.isGap((ch)))
{
eres++;
}