JAL-1610 check reference annotations against alignment, not sequence

[jalview.git] / src / jalview / datamodel / SequenceI.java

diff --git a/src/jalview/datamodel/SequenceI.java b/src/jalview/datamodel/SequenceI.java
index 8376047..fc67efd 100755 (executable)
--- a/src/jalview/datamodel/SequenceI.java
+++ b/src/jalview/datamodel/SequenceI.java
@@ -317,6 +317,8 @@ public interface SequenceI
 
   public AlignmentAnnotation[] getAnnotation();
 
+  public boolean hasAnnotation(AlignmentAnnotation ann);
+
   public void addAlignmentAnnotation(AlignmentAnnotation annotation);
 
   public void removeAlignmentAnnotation(AlignmentAnnotation annotation);