* {@inheritDoc}
*/
@Override
+ public int getTotalFeatureLength(String... type)
+ {
+ int result = 0;
+
+ for (String featureType : varargToTypes(type))
+ {
+ FeatureStore featureSet = featureStore.get(featureType);
+ if (featureSet != null)
+ {
+ result += featureSet.getTotalFeatureLength();
+ }
+ }
+ return result;
+
+ }
+
+ /**
+ * {@inheritDoc}
+ */
+ @Override
public List<SequenceFeature> getPositionalFeatures(String... type)
{
List<SequenceFeature> result = new ArrayList<SequenceFeature>();
}
return types;
}
+
+ /**
+ * Answers the minimum score held for positional or non-positional features
+ * for the specified type. This may be Float.NaN if there are no features, or
+ * none has a non-NaN score.
+ *
+ * @param type
+ * @param positional
+ * @return
+ */
+ public float getMinimumScore(String type, boolean positional)
+ {
+ return featureStore.containsKey(type) ? featureStore.get(type)
+ .getMinimumScore(positional) : Float.NaN;
+ }
+
+ /**
+ * Answers the maximum score held for positional or non-positional features
+ * for the specified type. This may be Float.NaN if there are no features, or
+ * none has a non-NaN score.
+ *
+ * @param type
+ * @param positional
+ * @return
+ */
+ public float getMaximumScore(String type, boolean positional)
+ {
+ return featureStore.containsKey(type) ? featureStore.get(type)
+ .getMaximumScore(positional) : Float.NaN;
+ }
}