JAL-2679 case-insensitive comparison of query and retrieved accession

[jalview.git] / src / jalview / ext / ensembl / EnsemblGene.java

diff --git a/src/jalview/ext/ensembl/EnsemblGene.java b/src/jalview/ext/ensembl/EnsemblGene.java
index 919134c..c8b59da 100644 (file)
--- a/src/jalview/ext/ensembl/EnsemblGene.java
+++ b/src/jalview/ext/ensembl/EnsemblGene.java
@@ -413,7 +413,7 @@ public class EnsemblGene extends EnsemblSeqProxy
     for (SequenceFeature sf : sfs)
     {
       String parent = (String) sf.getValue(PARENT);
-      if (parentIdentifier.equals(parent))
+      if (parentIdentifier.equalsIgnoreCase(parent))
       {
         transcriptFeatures.add(sf);
       }
@@ -452,7 +452,7 @@ public class EnsemblGene extends EnsemblSeqProxy
     {
       // NB features as gff use 'ID'; rest services return as 'id'
       String id = (String) sf.getValue("ID");
-      if ((GENE_PREFIX + accId).equals(id))
+      if ((GENE_PREFIX + accId).equalsIgnoreCase(id))
       {
         return true;
       }
@@ -479,7 +479,7 @@ public class EnsemblGene extends EnsemblSeqProxy
     if (isTranscript(type))
     {
       String parent = (String) sf.getValue(PARENT);
-      if (!(GENE_PREFIX + accessionId).equals(parent))
+      if (!(GENE_PREFIX + accessionId).equalsIgnoreCase(parent))
       {
         return false;
       }