JAL-1705 compute peptide variants from dna; add "consequence" feature on

[jalview.git] / src / jalview / ext / ensembl / EnsemblOverlap.java

diff --git a/src/jalview/ext/ensembl/EnsemblOverlap.java b/src/jalview/ext/ensembl/EnsemblOverlap.java
index 732b518..2ec4664 100644 (file)
--- a/src/jalview/ext/ensembl/EnsemblOverlap.java
+++ b/src/jalview/ext/ensembl/EnsemblOverlap.java
@@ -42,11 +42,14 @@ public class EnsemblOverlap extends EnsemblRestClient
   @Override
   public AlignmentI getSequenceRecords(String query) throws IOException
   {
+    long now = System.currentTimeMillis();
     // TODO: use a vararg String... for getSequenceRecords instead?
     List<String> queries = new ArrayList<String>();
     queries.add(query);
     FileParse fp = getSequenceReader(queries);
     FeaturesFile fr = new FeaturesFile(fp);
+    System.out.println(getClass().getName() + " took "
+            + (System.currentTimeMillis() - now) + "ms to fetch");
     return new Alignment(fr.getSeqsAsArray());
   }