JAL-3551 copy Jalview features to Pymol 'p' (with pull refactoring)

[jalview.git] / src / jalview / ext / jmol / JalviewJmolBinding.java

diff --git a/src/jalview/ext/jmol/JalviewJmolBinding.java b/src/jalview/ext/jmol/JalviewJmolBinding.java
index 038ca48..0b37ceb 100644 (file)
--- a/src/jalview/ext/jmol/JalviewJmolBinding.java
+++ b/src/jalview/ext/jmol/JalviewJmolBinding.java
@@ -39,7 +39,9 @@ import org.jmol.api.JmolViewer;
 import org.jmol.c.CBK;
 import org.jmol.viewer.Viewer;
 
+import jalview.api.AlignmentViewPanel;
 import jalview.api.FeatureRenderer;
+import jalview.api.SequenceRenderer;
 import jalview.bin.Cache;
 import jalview.datamodel.PDBEntry;
 import jalview.datamodel.SequenceI;
@@ -52,6 +54,7 @@ import jalview.structure.StructureCommand;
 import jalview.structure.StructureCommandI;
 import jalview.structure.StructureSelectionManager;
 import jalview.structures.models.AAStructureBindingModel;
+import javajs.util.BS;
 
 public abstract class JalviewJmolBinding extends AAStructureBindingModel
         implements JmolStatusListener, JmolSelectionListener,
@@ -997,4 +1000,23 @@ public abstract class JalviewJmolBinding extends AAStructureBindingModel
   {
     return ".spt";
   }
+
+  @Override
+  public void selectionChanged(BS arg0)
+  {
+    // TODO Auto-generated method stub
+
+  }
+
+  @Override
+  public SequenceRenderer getSequenceRenderer(AlignmentViewPanel avp)
+  {
+    return new jalview.gui.SequenceRenderer(avp.getAlignViewport());
+  }
+
+  @Override
+  public String getHelpURL()
+  {
+    return "http://wiki.jmol.org"; // BH 2018
+  }
 }