import jalview.api.AlignmentViewPanel;
import jalview.api.FeatureRenderer;
+import jalview.api.FeatureSettingsModelI;
import jalview.api.SequenceRenderer;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.HiddenColumns;
import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
+import jalview.gui.AppJmol;
import jalview.gui.IProgressIndicator;
import jalview.io.DataSourceType;
import jalview.io.StructureFile;
import jalview.structure.StructureSelectionManager;
import jalview.structures.models.AAStructureBindingModel;
import jalview.util.MessageManager;
+import jalview.ws.dbsources.Pdb;
import java.awt.Color;
import java.awt.Container;
FeatureRenderer fr = getFeatureRenderer(null);
if (fr != null)
{
+ // JAL-1842 ensure FeatureRenderer knows about RESNUM
fr.featuresAdded();
+ // ... apply feature settings (e.g. to hide RESNUM)
+ FeatureSettingsModelI colours = new Pdb().getFeatureColourScheme();
+ ((AppJmol) getViewer()).getAlignmentPanel().av
+ .applyFeaturesStyle(colours);
}
refreshGUI();
loadNotifiesHandled++;