/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
-package jalview.jbgui;
+package jalview.fts.core;
+import jalview.fts.api.FTSDataColumnI;
+import jalview.fts.api.GFTSPanelI;
+import jalview.fts.core.FTSDataColumnPreferences.PreferenceSource;
import jalview.gui.Desktop;
+import jalview.gui.IProgressIndicator;
import jalview.gui.JvSwingUtils;
-import jalview.jbgui.PDBDocFieldPreferences.PreferenceSource;
+import jalview.gui.SequenceFetcher;
import jalview.util.MessageManager;
-import jalview.ws.dbsources.PDBRestClient.PDBDocField;
import java.awt.BorderLayout;
import java.awt.CardLayout;
import java.awt.Dimension;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
+import java.awt.event.FocusEvent;
+import java.awt.event.FocusListener;
import java.awt.event.KeyAdapter;
import java.awt.event.KeyEvent;
import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
+import java.util.ArrayList;
import java.util.Arrays;
+import java.util.Collection;
+import java.util.Collections;
+import java.util.Comparator;
+import java.util.List;
import javax.swing.ImageIcon;
import javax.swing.JButton;
import javax.swing.JTabbedPane;
import javax.swing.JTable;
import javax.swing.JTextField;
+import javax.swing.Timer;
import javax.swing.event.ChangeEvent;
import javax.swing.event.ChangeListener;
import javax.swing.event.DocumentEvent;
import javax.swing.event.DocumentListener;
+import javax.swing.table.DefaultTableModel;
/**
- * GUI layout for PDB Fetch Panel
+ * This class provides the swing GUI layout for FTS Panel and implements most of
+ * the contracts defined in GFSPanelI
*
* @author tcnofoegbu
*
*/
+
@SuppressWarnings("serial")
-public abstract class GPDBSearchPanel extends JPanel
+public abstract class GFTSPanel extends JPanel implements GFTSPanelI
{
- protected String frameTitle = MessageManager
- .getString("label.pdb_sequence_getcher");
+ protected JInternalFrame mainFrame = new JInternalFrame(
+ getFTSFrameTitle());
- protected JInternalFrame mainFrame = new JInternalFrame(frameTitle);
+ protected IProgressIndicator progressIdicator;
- protected JComboBox<PDBDocField> cmb_searchTarget = new JComboBox<PDBDocField>();
+ protected JComboBox<FTSDataColumnI> cmb_searchTarget = new JComboBox<FTSDataColumnI>();
protected JButton btn_ok = new JButton();
protected JTextField txt_search = new JTextField(20);
- protected JTable tbl_summary = new JTable()
+ protected SequenceFetcher seqFetcher;
+
+ protected Collection<FTSDataColumnI> wantedFields;
+
+ private JTable tbl_summary = new JTable()
{
@Override
public String getToolTipText(MouseEvent evt)
private JTabbedPane tabbedPane = new JTabbedPane();
- private PDBDocFieldPreferences pdbDocFieldPrefs = new PDBDocFieldPreferences(
- PreferenceSource.SEARCH_SUMMARY);
-
private JPanel pnl_actions = new JPanel();
private JPanel pnl_results = new JPanel(new CardLayout());
private BorderLayout mainLayout = new BorderLayout();
- protected PDBDocField[] previousWantedFields;
+ protected Object[] previousWantedFields;
- public GPDBSearchPanel()
+ public GFTSPanel()
{
try
{
case KeyEvent.VK_ENTER: // enter key
if (btn_ok.isEnabled())
{
- btn_ok_ActionPerformed();
+ okAction();
}
evt.consume();
break;
@Override
public void actionPerformed(ActionEvent e)
{
- btn_ok_ActionPerformed();
+ okAction();
}
});
btn_ok.addKeyListener(new KeyAdapter()
{
if (evt.getKeyCode() == KeyEvent.VK_ENTER)
{
- btn_ok_ActionPerformed();
+ okAction();
}
}
});
}
txt_search.setToolTipText(JvSwingUtils.wrapTooltip(true,
tooltipText));
- txt_search_ActionPerformed();
+ searchAction();
}
});
}
});
- txt_search.getDocument().addDocumentListener(new DocumentListener()
+ final DeferredTextInputListener listener = new DeferredTextInputListener(
+ 500,
+ new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ searchAction();
+ }
+ }, false);
+ txt_search.getDocument().addDocumentListener(listener);
+ txt_search.addFocusListener(new FocusListener()
{
@Override
- public void insertUpdate(DocumentEvent e)
+ public void focusGained(FocusEvent e)
{
- txt_search_ActionPerformed();
+ listener.start();
}
@Override
- public void removeUpdate(DocumentEvent e)
+ public void focusLost(FocusEvent e)
{
- txt_search_ActionPerformed();
- }
-
- @Override
- public void changedUpdate(DocumentEvent e)
- {
- txt_search_ActionPerformed();
+ listener.stop();
}
});
btn_back.setEnabled(false);
btn_cancel.setEnabled(false);
btn_ok.setEnabled(false);
- previousWantedFields = PDBDocFieldPreferences
- .getSearchSummaryFields().toArray(new PDBDocField[0]);
+ previousWantedFields = getFTSRestClient()
+ .getAllDefaulDisplayedDataColumns()
+ .toArray(new Object[0]);
}
if (sourceTabbedPane.getTitleAt(index).equals(searchTabTitle))
{
btn_cancel.setEnabled(true);
if (wantedFieldsUpdated())
{
- txt_search_ActionPerformed();
+ searchAction();
}
else
{
tabbedPane.addChangeListener(changeListener);
tabbedPane.setPreferredSize(new Dimension(500, 300));
tabbedPane.add(searchTabTitle, scrl_searchResult);
- tabbedPane.add(configureCols, pdbDocFieldPrefs);
+ tabbedPane.add(configureCols, new FTSDataColumnPreferences(
+ PreferenceSource.SEARCH_SUMMARY, getFTSRestClient()));
pnl_actions.add(btn_back);
pnl_actions.add(btn_ok);
mainFrame.setVisible(true);
mainFrame.setContentPane(this);
mainFrame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE);
- Desktop.addInternalFrame(mainFrame, frameTitle, 800, 400);
+ Desktop.addInternalFrame(mainFrame, getFTSFrameTitle(), 800, 400);
+ }
+
+ public class DeferredTextInputListener implements DocumentListener
+ {
+ private final Timer swingTimer;
+
+ public DeferredTextInputListener(int timeOut, ActionListener listener,
+ boolean repeats)
+ {
+ swingTimer = new Timer(timeOut, listener);
+ swingTimer.setRepeats(repeats);
+ }
+
+ public void start()
+ {
+ swingTimer.start();
+ }
+
+ public void stop()
+ {
+ swingTimer.stop();
+ }
+
+ @Override
+ public void insertUpdate(DocumentEvent e)
+ {
+ swingTimer.restart();
+ }
+
+ @Override
+ public void removeUpdate(DocumentEvent e)
+ {
+ swingTimer.restart();
+ }
+
+ @Override
+ public void changedUpdate(DocumentEvent e)
+ {
+ swingTimer.restart();
+ }
+
}
public boolean wantedFieldsUpdated()
return true;
}
- return Arrays.equals(PDBDocFieldPreferences.getSearchSummaryFields()
- .toArray(new PDBDocField[0]), previousWantedFields) ? false
+ return Arrays.equals(getFTSRestClient()
+ .getAllDefaulDisplayedDataColumns()
+ .toArray(new Object[0]), previousWantedFields) ? false
: true;
}
}
}
- public JComboBox<PDBDocField> getCmbSearchTarget()
+ public JComboBox<FTSDataColumnI> getCmbSearchTarget()
{
return cmb_searchTarget;
}
return mainFrame;
}
- public abstract void transferToSequenceFetcher(String ids);
+ protected void delayAndEnableActionButtons()
+ {
+ new Thread()
+ {
+ @Override
+ public void run()
+ {
+ try
+ {
+ Thread.sleep(1500);
+ } catch (InterruptedException e)
+ {
+ e.printStackTrace();
+ }
+ btn_ok.setEnabled(true);
+ btn_back.setEnabled(true);
+ btn_cancel.setEnabled(true);
+ }
+ }.start();
+ }
+
+ protected void checkForErrors()
+ {
+ lbl_warning.setVisible(false);
+ if (errorWarning.length() > 0)
+ {
+ lbl_loading.setVisible(false);
+ lbl_warning.setToolTipText(JvSwingUtils.wrapTooltip(true,
+ errorWarning.toString()));
+ lbl_warning.setVisible(true);
+ }
+ }
+
+ protected void btn_back_ActionPerformed()
+ {
+ mainFrame.dispose();
+ new SequenceFetcher(progressIdicator);
+ }
+
+ protected void disableActionButtons()
+ {
+ btn_ok.setEnabled(false);
+ btn_back.setEnabled(false);
+ btn_cancel.setEnabled(false);
+ }
+
+ protected void btn_cancel_ActionPerformed()
+ {
+ mainFrame.dispose();
+ }
+
+ /**
+ * Populates search target combo-box options
+ */
+ public void populateCmbSearchTargetOptions()
+ {
+ List<FTSDataColumnI> searchableTargets = new ArrayList<FTSDataColumnI>();
+ try
+ {
+ Collection<FTSDataColumnI> foundFTSTargets = getFTSRestClient()
+ .getSearchableDataColumns();
+ searchableTargets.addAll(foundFTSTargets);
+ } catch (Exception e)
+ {
+ e.printStackTrace();
+ }
+
+ Collections.sort(searchableTargets, new Comparator<FTSDataColumnI>()
+ {
+ @Override
+ public int compare(FTSDataColumnI o1, FTSDataColumnI o2)
+ {
+ return o1.getName().compareTo(o2.getName());
+ }
+ });
+
+ for (FTSDataColumnI searchTarget : searchableTargets)
+ {
+ cmb_searchTarget.addItem(searchTarget);
+ }
+ }
+
- public abstract void txt_search_ActionPerformed();
+ public void transferToSequenceFetcher(String ids)
+ {
+ // mainFrame.dispose();
+ seqFetcher.getTextArea().setText(ids);
+ Thread worker = new Thread(seqFetcher);
+ worker.start();
+ }
- public abstract void btn_ok_ActionPerformed();
+ @Override
+ public String getTypedText()
+ {
+ return txt_search.getText().trim();
+ }
- public abstract void btn_back_ActionPerformed();
+ @Override
+ public JTable getResultTable()
+ {
+ return tbl_summary;
+ }
- public abstract void btn_cancel_ActionPerformed();
+ public void reset()
+ {
+ lbl_loading.setVisible(false);
+ errorWarning.setLength(0);
+ lbl_warning.setVisible(false);
+ btn_ok.setEnabled(false);
+ mainFrame.setTitle(getFTSFrameTitle());
+ referesh();
+ tbl_summary.setModel(new DefaultTableModel());
+ tbl_summary.setVisible(false);
+ }
+
+ @Override
+ public void setErrorMessage(String message)
+ {
+ errorWarning.append(message);
+ }
+
+ @Override
+ public void updateSearchFrameTitle(String title)
+ {
+ mainFrame.setTitle(title);
+ }
- public abstract void populateCmbSearchTargetOptions();
+ @Override
+ public void setSearchInProgress(Boolean isSearchInProgress)
+ {
+ lbl_loading.setVisible(isSearchInProgress);
+ }
+ public void referesh()
+ {
+ mainFrame.setTitle(getFTSFrameTitle());
+ }
}
git://source.jalview.org / jalview.git / blobdiff