Merge branch 'feature/JAL-3127_seqidChainshading' into merge/JAL-3127

[jalview.git] / src / jalview / fts / core / GFTSPanel.java

diff --git a/src/jalview/fts/core/GFTSPanel.java b/src/jalview/fts/core/GFTSPanel.java
index 5a11107..232561c 100644 (file)
--- a/src/jalview/fts/core/GFTSPanel.java
+++ b/src/jalview/fts/core/GFTSPanel.java
@@ -34,6 +34,7 @@ import jalview.util.MessageManager;
 import java.awt.BorderLayout;
 import java.awt.CardLayout;
 import java.awt.Dimension;
+import java.awt.Font;
 import java.awt.event.ActionEvent;
 import java.awt.event.ActionListener;
 import java.awt.event.FocusAdapter;
@@ -86,13 +87,15 @@ import javax.swing.text.JTextComponent;
 @SuppressWarnings("serial")
 public abstract class GFTSPanel extends JPanel implements GFTSPanelI
 {
+  private static final Font VERDANA_12 = new Font("Verdana", 0, 12);
+
   protected JInternalFrame mainFrame = new JInternalFrame(
           getFTSFrameTitle());
 
-  protected JTabbedPane mainFramTabs = new JTabbedPane();
+  protected JTabbedPane tabs = new JTabbedPane();
   protected IProgressIndicator progressIndicator;
 
-  protected JComboBox<FTSDataColumnI> cmb_searchTarget = new JComboBox<FTSDataColumnI>();
+  protected JComboBox<FTSDataColumnI> cmb_searchTarget = new JComboBox<>();
 
   protected JButton btn_ok = new JButton();
 
@@ -151,7 +154,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
 
   protected int pageLimit;
 
-  protected HashSet<String> paginatorCart = new HashSet<String>();
+  protected HashSet<String> paginatorCart = new HashSet<>();
 
   private static final int MIN_WIDTH = 670;
 
@@ -252,12 +255,12 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     {
       if (fetcher == null)
       {
-        mainFramTabs = null;
+        tabs = null;
       }
       jbInit();
       if (fetcher != null)
       {
-        mainFramTabs.addTab(MessageManager.getString("label.retrieve_ids"),
+        tabs.addTab(MessageManager.getString("label.retrieve_ids"),
                 fetcher);
         fetcher.setDatabaseChooserVisible(false);
         fetcher.embedWithFTSPanel(this);
@@ -270,8 +273,8 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
         public void focusGained(FocusEvent e)
         {
           // TODO: make selected tab gain focus in correct widget
-          if (mainFramTabs != null
-                  && mainFramTabs.getSelectedComponent() == ftsPanel)
+          if (tabs != null
+                  && tabs.getSelectedComponent() == ftsPanel)
           {
             txt_search.requestFocusInWindow();
           }
@@ -293,18 +296,18 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
   private void jbInit() throws Exception
   {
 
-    txt_search = new JvCacheableInputBox<String>(getCacheKey());
+    txt_search = new JvCacheableInputBox<>(getCacheKey());
     populateCmbSearchTargetOptions();
     Integer width = getTempUserPrefs().get("FTSPanel.width") == null ? 800
             : getTempUserPrefs().get("FTSPanel.width");
     Integer height = getTempUserPrefs().get("FTSPanel.height") == null ? 400
             : getTempUserPrefs().get("FTSPanel.height");
     lbl_warning.setVisible(false);
-    lbl_warning.setFont(new java.awt.Font("Verdana", 0, 12));
+    lbl_warning.setFont(VERDANA_12);
     lbl_loading.setVisible(false);
-    lbl_loading.setFont(new java.awt.Font("Verdana", 0, 12));
+    lbl_loading.setFont(VERDANA_12);
     lbl_blank.setVisible(true);
-    lbl_blank.setFont(new java.awt.Font("Verdana", 0, 12));
+    lbl_blank.setFont(VERDANA_12);
 
     tbl_summary.setAutoCreateRowSorter(true);
     tbl_summary.getTableHeader().setReorderingAllowed(false);
@@ -357,10 +360,34 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
       }
     });
 
+    JButton txt_help = new JButton("?");
+    txt_help.setFont(VERDANA_12);
+    txt_help.setPreferredSize(new Dimension(15, 15));
+    txt_help.setToolTipText(MessageManager.getString("action.help"));
+    txt_help.addActionListener(new ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent e)
+      {
+        showHelp();
+      }
+    });
+
     btn_autosearch.setText(MessageManager.getString("option.autosearch"));
     btn_autosearch.setToolTipText(
             MessageManager.getString("option.enable_disable_autosearch"));
-    btn_back.setFont(new java.awt.Font("Verdana", 0, 12));
+    btn_autosearch.setSelected(
+            jalview.bin.Cache.getDefault(getAutosearchPreference(), true));
+    btn_autosearch.addActionListener(new java.awt.event.ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent e)
+      {
+        jalview.bin.Cache.setProperty(getAutosearchPreference(),
+                Boolean.toString(btn_autosearch.isSelected()));
+      }
+    });
+    btn_back.setFont(VERDANA_12);
     btn_back.setText(MessageManager.getString("action.back"));
     btn_back.addActionListener(new java.awt.event.ActionListener()
     {
@@ -383,7 +410,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     });
 
     btn_ok.setEnabled(false);
-    btn_ok.setFont(new java.awt.Font("Verdana", 0, 12));
+    btn_ok.setFont(VERDANA_12);
     btn_ok.setText(MessageManager.getString("action.ok"));
     btn_ok.addActionListener(new java.awt.event.ActionListener()
     {
@@ -407,7 +434,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     btn_next_page.setEnabled(false);
     btn_next_page.setToolTipText(
             MessageManager.getString("label.next_page_tooltip"));
-    btn_next_page.setFont(new java.awt.Font("Verdana", 0, 12));
+    btn_next_page.setFont(VERDANA_12);
     btn_next_page.setText(MessageManager.getString("action.next_page"));
     btn_next_page.addActionListener(new java.awt.event.ActionListener()
     {
@@ -432,7 +459,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     btn_prev_page.setEnabled(false);
     btn_prev_page.setToolTipText(
             MessageManager.getString("label.prev_page_tooltip"));
-    btn_prev_page.setFont(new java.awt.Font("Verdana", 0, 12));
+    btn_prev_page.setFont(VERDANA_12);
     btn_prev_page.setText(MessageManager.getString("action.prev_page"));
     btn_prev_page.addActionListener(new java.awt.event.ActionListener()
     {
@@ -465,7 +492,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
       btn_next_page.setVisible(false);
     }
 
-    btn_cancel.setFont(new java.awt.Font("Verdana", 0, 12));
+    btn_cancel.setFont(VERDANA_12);
     btn_cancel.setText(MessageManager.getString("action.cancel"));
     btn_cancel.addActionListener(new java.awt.event.ActionListener()
     {
@@ -488,7 +515,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     });
     scrl_searchResult.setPreferredSize(new Dimension(width, height));
 
-    cmb_searchTarget.setFont(new java.awt.Font("Verdana", 0, 12));
+    cmb_searchTarget.setFont(VERDANA_12);
     cmb_searchTarget.addItemListener(new ItemListener()
     {
       @Override
@@ -521,7 +548,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
       }
     });
 
-    txt_search.setFont(new java.awt.Font("Verdana", 0, 12));
+    txt_search.setFont(VERDANA_12);
 
     txt_search.getEditor().getEditorComponent()
             .addKeyListener(new KeyAdapter()
@@ -655,6 +682,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     pnl_results.add(tabbedPane);
     pnl_inputs.add(cmb_searchTarget);
     pnl_inputs.add(txt_search);
+    pnl_inputs.add(txt_help);
     pnl_inputs.add(btn_autosearch);
     pnl_inputs.add(lbl_loading);
     pnl_inputs.add(lbl_warning);
@@ -667,12 +695,13 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     this.add(pnl_results, java.awt.BorderLayout.CENTER);
     this.add(pnl_actions, java.awt.BorderLayout.SOUTH);
     mainFrame.setVisible(true);
-    if (mainFramTabs != null)
+    if (tabs != null)
     {
-      mainFramTabs.setOpaque(true);
-      mainFramTabs.insertTab("Free Text Search", null, this, "", 0);
-      mainFrame.setContentPane(mainFramTabs);
-      mainFramTabs.setVisible(true);
+      tabs.setOpaque(true);
+      tabs.insertTab(MessageManager.getString("label.free_text_search"),
+              null, this, "", 0);
+      mainFrame.setContentPane(tabs);
+      tabs.setVisible(true);
     }
     else
     {
@@ -698,6 +727,8 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
     Desktop.addInternalFrame(mainFrame, getFTSFrameTitle(), width, height);
   }
 
+  abstract protected void showHelp();
+
   protected void closeAction()
   {
     getTempUserPrefs().put("FTSPanel.width", this.getWidth());
@@ -860,7 +891,7 @@ public abstract class GFTSPanel extends JPanel implements GFTSPanelI
    */
   public void populateCmbSearchTargetOptions()
   {
-    List<FTSDataColumnI> searchableTargets = new ArrayList<FTSDataColumnI>();
+    List<FTSDataColumnI> searchableTargets = new ArrayList<>();
     try
     {
       Collection<FTSDataColumnI> foundFTSTargets = getFTSRestClient()