fixed last commit

[jalview.git] / src / jalview / fts / service / threedbeacons / TDBeaconsFTSRestClient.java

diff --git a/src/jalview/fts/service/threedbeacons/TDBeaconsFTSRestClient.java b/src/jalview/fts/service/threedbeacons/TDBeaconsFTSRestClient.java
index 884dced..655b960 100644 (file)
--- a/src/jalview/fts/service/threedbeacons/TDBeaconsFTSRestClient.java
+++ b/src/jalview/fts/service/threedbeacons/TDBeaconsFTSRestClient.java
@@ -143,7 +143,6 @@ public class TDBeaconsFTSRestClient extends FTSRestClient
           Map<String, Object> jsonObj, FTSRestRequest tdbRestRequest)
   {
     FTSRestResponse searchResult = new FTSRestResponse();
-    //searchResult.setNumberOfItemsFound(1);
     List<FTSData> result = null;
     
     try
@@ -152,18 +151,18 @@ public class TDBeaconsFTSRestClient extends FTSRestClient
       {
         jsonObj = (Map<String, Object>) JSONUtils.parse(tdbJsonResponseString);
       }
-      System.out.println(jsonObj);
-      //Map<String, Object> tdbResponse = (Map<String, Object>) jsonObj.get("structures");
+      //System.out.println(jsonObj);
+      
+      Object uniprot_entry = jsonObj.get("uniprot_entry"); 
+      System.out.println(uniprot_entry);
       
-      //System.out.println((Map<String, Object>) jsonObj.get("uniprot_entry")); 
       Long seqLength = (Long) ((Map<String, Object>) jsonObj.get("uniprot_entry")).get("sequence_length");
-      System.out.println(seqLength);
+      System.out.println("seqLenght :" + seqLength);
+      
       result = new ArrayList<>();
       List<Object> structures = (List<Object>) jsonObj.get("structures");
-      //System.out.println(jsonObj.get("structures"));
-      //System.out.println(structures);
-      System.out.println("ZERO : " + structures.get(0));
-      System.out.println("1 : " + structures.get(1));
+    //Map<String, Object> tdbResponse = (Map<String, Object>) jsonObj.get("structures");
+      
       int numFound = 0;
       for (Iterator<Object> strucIter = structures.iterator(); strucIter
               .hasNext();)
@@ -173,7 +172,7 @@ public class TDBeaconsFTSRestClient extends FTSRestClient
         numFound++;
         //System.out.println(structure);
       }
-      //System.out.println(structures);
+      
       System.out.println("1 : " + structures.get(1));
       searchResult.setNumberOfItemsFound(numFound); 
       searchResult.setSearchSummary(result);