JAL-4392 Merging consensus secondary structure

[jalview.git] / src / jalview / gui / AlignFrame.java

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index c49626b..1bf2529 100644 (file)
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -802,6 +802,7 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
       }
       ap.av.updateConservation(ap);
       ap.av.updateConsensus(ap);
+      ap.av.updateSecondaryStructureConsensus(ap);
       ap.av.updateStrucConsensus(ap);
     }
   }
@@ -5717,6 +5718,13 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
     viewport.setShowConsensusHistogram(showConsensusHistogram.getState());
     alignPanel.updateAnnotation(applyAutoAnnotationSettings.getState());
   }
+  
+  @Override
+  protected void showSSConsensusHistogram_actionPerformed(ActionEvent e)
+  {
+    viewport.setShowSSConsensusHistogram(showSSConsensusHistogram.getState());
+    alignPanel.updateAnnotation(applyAutoAnnotationSettings.getState());
+  }
 
   /*
    * (non-Javadoc)