JAL-1641 cherry-picked changes into develop compatible branch

[jalview.git] / src / jalview / gui / AlignFrame.java

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index 80838e2..1b2410a 100644 (file)
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -1306,6 +1306,7 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
 
     try
     {
+      Desktop.setCurrentAlignFrame(this);
       cap.setText(new FormatAdapter().formatSequences(e.getActionCommand(),
               viewport.getAlignment(), omitHidden,
               viewport.getColumnSelection()));
@@ -5787,8 +5788,8 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
 
   public void setShowSeqFeatures(boolean b)
   {
-    showSeqFeatures.setSelected(true);
-    viewport.setShowSequenceFeatures(true);
+    showSeqFeatures.setSelected(b);
+    viewport.setShowSequenceFeatures(b);
   }
 
   /*