profile visualizations are now logos

[jalview.git] / src / jalview / gui / AlignFrame.java

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index 5529f2c..aef8961 100755 (executable)
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -656,7 +656,7 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
     showGroupConsensus.setSelected(av.showGroupConsensus);
     showGroupConservation.setSelected(av.showGroupConservation);
     showConsensusHistogram.setSelected(av.showConsensusHistogram);
-    showConsensusProfile.setSelected(av.showConsensusProfile);
+    showSequenceLogo.setSelected(av.showSequenceLogo);
     setColourSelected(ColourSchemeProperty.getColourName(av
             .getGlobalColourScheme()));
 
@@ -4521,9 +4521,9 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
   /* (non-Javadoc)
    * @see jalview.jbgui.GAlignFrame#showConsensusProfile_actionPerformed(java.awt.event.ActionEvent)
    */
-  protected void showConsensusProfile_actionPerformed(ActionEvent e)
+  protected void showSequenceLogo_actionPerformed(ActionEvent e)
   {
-    viewport.setShowConsensusProfile(showConsensusProfile.getState());
+    viewport.setShowSequenceLogo(showSequenceLogo.getState());
     alignPanel.updateAnnotation(applyAutoAnnotationSettings.getState());
   }
   protected void applyAutoAnnotationSettings_actionPerformed(ActionEvent e)